Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2266 ATGAAGTTATATACTTCATTGTTGTTACTTGGTTTGGTTTCCATGCTCTCTTTTGTGGCTTCTGTCATGGTCCCTTCAAATGAAGTTTTGGCACTTAAAACTTTCAAGGAAGCTGTGTATGAAGATCCACATATGGTTTTGTCCAATTGGAATACTTTGGATTCAGATCTTTGTGACTGGAATGGTGTTTCTTGCACTACAACTCGAGATCATGTCATCAAGCTTAACTTATCAGGGGCTTCATTAAGGGGATTTCTTGCTCCAGAATTTGGGAAAATCACCAACTTACAAGAACTGATCTTGCATGGCAACAGTCTCATTGGAGTAATACCTAAAGAATTGGGCATGCTGAAATCTCTTAAGGTGTTGGATTTGGGAATGAATCAGTTAACTGGACCAATTCCTCCGGAGATTGGAAATTTGACCCAAGTTACAAAAATAAACCTGCAGTCCAATGGATTGACTGGTAGGATACCTCCAGAGCTAGGAAATTTGAAATTCCTTCAAGAGCTTCGGCTGGATAGGAATAAGCTTCAAGGATCTCTTCCTGGTGGTGCCAGATCAAATTTTTCTTCAAATATACATGGGATGTATGCCTCAGGTGTGAATTTAACTGGTTTCTGTCGTGCATCTCAGCTAAAATTTGCAGATTTTTCATATAACTTTTTTGTTGGTAGCATACCCAAATGCTTGGCATATCTTCCAAGATCAAGCTTTCAAGGAAATTGTCTCCATATCAAAGACATAAAACAGCGAACTTCGGTGCAATGTGCTGGTGCTTCACCTTCCCAAAGCGGTCCAGTAGTGAACCCAAAGTACCAGCCTGCTACTAAACATGTGACCAAGCATCAAGAAGCATCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTGACCGGAACCATGGTTGGTTCTCTCTTTCTTATTGCTATTCTCACAGCGATTCAGAGGTGTAACAACAAATCATCTATCATTATTCCTTGGAAAAAATCTGCAAGCGGAAAAGATTATATGGCAGTACATATAGACTCTGAGATGTTGAAGGATGTGATGAGGTATAGCAGGCAGGACCTTGAAGTGGCTTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCGGATAGTGTGGTCTACAAGGGTACAATGAAAGGTGGACCTGAGATTGCTGTGATTTCCCTCTGCATCAAGGAAGAGACTTGGACAGGATACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTGAATCATGATAACACAGGAAAGCTGCTAGGATATTGTAGAGAGAGCAGTCCATTTACAAGGATGCTGGTTTTTGAATATGCATCAAATGGAACACTTTATGATCACCTACATTCTTATGAAGAAGGGTGCCAGTTGTCTTGGACAAGGCGTATGAAAATTATCATAGGCATTGCACGTGGACTCAAGTATTTGCACACTGAAATTGAGCCGCCATTCACTATCTCAGAATTGAATTCCAATGCCGTTTACCTCACAGAAGATTTCTCCCCTAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAAAATTCCGGTTCTGTTAGTAGCCAGGGTGCTGTTTGTATTCTACCAAACTCTCTTGAAGCGCGGCGTCTCGACACCAAAGGAAACATCTATGCTTTTGCAGTACTTCTATTGGAGATAATCAGTGGGAGACCTCCATACTGCAAGGACAAAGGATACTTGGTGGATTGGGCTAGGGAGTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGATCCTGAGTTGAAACATTTTAGATATGAAGACCTCAAAGAAATATGTGAGGTGATAAGTCTTTGCATCAGTCCTGATCCCTCTGTCAGTCCATCATCAATGCGTGAATTATGCAGTATGCTGGAGAGCAAAATAGACACATCAATAAATTTGGAGCTAAAGGCATCATTGGCTTGGGCTGAACTAGCACTTTCATCATAA 1989 0.4113 MKLYTSLLLLGLVSMLSFVASVMVPSNEVLALKTFKEAVYEDPHMVLSNWNTLDSDLCDWNGVSCTTTRDHVIKLNLSGASLRGFLAPEFGKITNLQELILHGNSLIGVIPKELGMLKSLKVLDLGMNQLTGPIPPEIGNLTQVTKINLQSNGLTGRIPPELGNLKFLQELRLDRNKLQGSLPGGARSNFSSNIHGMYASGVNLTGFCRASQLKFADFSYNFFVGSIPKCLAYLPRSSFQGNCLHIKDIKQRTSVQCAGASPSQSGPVVNPKYQPATKHVTKHQEASKPAWLLALEIVTGTMVGSLFLIAILTAIQRCNNKSSIIIPWKKSASGKDYMAVHIDSEMLKDVMRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEETWTGYLELYFQREVADLARLNHDNTGKLLGYCRESSPFTRMLVFEYASNGTLYDHLHSYEEGCQLSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFSPKLVDFESWKTILERSEKNSGSVSSQGAVCILPNSLEARRLDTKGNIYAFAVLLLEIISGRPPYCKDKGYLVDWAREYLEMPEVMSYVVDPELKHFRYEDLKEICEVISLCISPDPSVSPSSMRELCSMLESKIDTSINLELKASLAWAELALSS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2266 662 ProSiteProfiles Protein kinase domain profile. 363 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2266 662 Gene3D Phosphorylase Kinase; domain 1 337 444 - -
Aed5g2266 662 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 662 - -
Aed5g2266 662 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Aed5g2266 662 SUPERFAMILY Protein kinase-like (PK-like) 341 638 IPR011009 -
Aed5g2266 662 PANTHER PROTEIN MALE DISCOVERER 2 7 662 - -
Aed5g2266 662 Pfam Protein tyrosine and serine/threonine kinase 367 623 IPR001245 GO:0004672|GO:0006468
Aed5g2266 662 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Aed5g2266 662 Pfam Leucine rich repeat 94 154 IPR001611 GO:0005515
Aed5g2266 662 SUPERFAMILY L domain-like 27 235 - -
Aed5g2266 662 Gene3D Transferase(Phosphotransferase) domain 1 445 652 - -
Aed5g2266 662 Gene3D Ribonuclease Inhibitor 140 263 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2266 Aed-Chr5 24508298 24513987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2266 41 642 Receptor kinase-like Gene Family AT5G45780 28.385 8.43e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aed5g2266 PK_Tyr_Ser-Thr 4.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2266 - - gmx:100781978 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1708 11 20723766 20730926 Aed5g2266 5 24508298 24513987 PCT