Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2254 ATGCCTGAGGGAAGCCTTGAAATTTTTCTTGTTAATGCCAAAGGCCTTGAGAACACTGATTATCTTTGTAAAATGGACCCTTATGTGATCCTCGTTTGTCGCACTCAGGAGCAAAAAAGCAGTGTTGCATCAGGTCAGGGAAGTGAGCCAGAATGGAATGAGAATTTTGTATTCAACGTGTCTGAGGGCGTTTCCGAAGTGAGATTGAAGATCATGGACAGCGATACCGGCACGGCTCATGATAGCGTTGGAGAAGCTACCATTCCTCTAGGTGCATTGTTTAGTGAAGGAAGAATCCCACCAACTTCATACAATGTTGTCAAGGATGGCGAATATTGTGGCTCCATTAAAATTGGCCTCACTTTTACGCCTCAGGATCGCAGGGAACGCTGCCTAGAGGAAAGTTTTGGGGGATGGAAGGAGTCTGGTTACAGAGACTGA 441 0.458 MPEGSLEIFLVNAKGLENTDYLCKMDPYVILVCRTQEQKSSVASGQGSEPEWNENFVFNVSEGVSEVRLKIMDSDTGTAHDSVGEATIPLGALFSEGRIPPTSYNVVKDGEYCGSIKIGLTFTPQDRRERCLEESFGGWKESGYRD 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2254 146 Pfam C2 domain 4 98 IPR000008 -
Aed5g2254 146 PANTHER C2 DOMAIN-CONTAINING 2 142 - -
Aed5g2254 146 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Aed5g2254 146 PANTHER OS02G0640000 PROTEIN 2 142 - -
Aed5g2254 146 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 125 IPR035892 -
Aed5g2254 146 Gene3D C2 domain 2 125 IPR035892 -
Aed5g2254 146 SMART C2_3c 5 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2254 Aed-Chr5 24441729 24443056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2254 4 126 C2H2 Transcription Factor Family AT4G21160 29.268 2.65e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2254 - - gmx:100782974 269.626