Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2237 ATGGCGAATAATAATAAACTGAATGTAAGGGTAAGAGAAGCAAGTCTGGTGGCACCAGCAGAAGAAACAAAAAAGGGTTTGTACTTCCTTTCAAACCTTGACCAGAACATAGCACATCAAGTTCGAACAGTTTACTTTTACAACAAGTTTGGATGTAGAAGCAACGAGGAAGCAGCAAAAGTGATGAAGGAATCATTGTCAAAGGTTCTTGTTCACTATTACCCTATGGCTGGAAGATTGGCCATCAGTTCTGAAGGGAAACTCATTATAGACTGCACTGGTGAGGGTGTTGTGTTTGTTGAGGCTGAAGCTAACTGTTTCATCAAAGACTTGGAGGAATATTTGACAAAACCTGACCTTGAAGCTCTTGGAAAACTGGTTTATGATATCCCTGGTGCAACCAACATGCTTCAGATACCTCCTTTGCTAATTCAGGTGACAAAATTCAACTGTGGAGGATTTGTTTTGGGCGTAAACTTGAACCATTGCATGGATGATGGCATAAGTGCTATGCAATTTGTGAACACGTGGGGTGAGACAGCCAGAGGCTTGGACTTGAGCATTTCGCCAGTTCTTGATCGAACCATACTAAGTGCACGAAACCCTCCAAAAATAGAGTTTCCACACCACGAGTTCGATGAAATTGAGGATGTCTCAAATGCCACAAAACTCTACGAGGAAGAGGAGATCCTCTACAAGTCCTTCTGTTTCGACCCAGATAAGCTTGAGCTGCTTAAGAAACTAGCCACAGAAGATGGTGCGGTCAAAAAGTGCTCCACTTTTGAAGCACTCACAGCTTTTGTGTGGAGAGCTAGAAGCGAAGCCCTAAGTTTGAACCCTAATCAACAAACGAAGCTACTTTTTGCTGTTGATGGAAGGTCTAAATTCGTGCCTCAAATACCAAAGGGGTTCTTTGGGAACGCTATTGTGTTGTCAAATGCTCTGTGCAATGTGGGTGAGTTAGTGAATAACCCTTTTTCATTTACTGTGGGATTGGTTGGAAAGGCAATTGAAATGGTCACGGATAGTTACATGAGATCTGCTATTGATTATTTTGAAGTGAAGAGATCAAGGCCTTCCTTAACAGCAACCCTTGTGATCACAACATGGACTAGGATACCTTTCCACAATGCTGATTTTGGATGGGGGAAGCCCTTCTTTTTTGGGCCTGTAACTTTGCCTGGGAAAGAAGTCATTTTGTTCTTGTCACCTAGTGATGAAGAAAGTAAAAGCATAAACGTGCTTCTGGGTTTGCCTGCTTCTGCCATGAAAAGGTTTGAAAGGCTCATGCAGATATGA 1299 0.4242 MANNNKLNVRVREASLVAPAEETKKGLYFLSNLDQNIAHQVRTVYFYNKFGCRSNEEAAKVMKESLSKVLVHYYPMAGRLAISSEGKLIIDCTGEGVVFVEAEANCFIKDLEEYLTKPDLEALGKLVYDIPGATNMLQIPPLLIQVTKFNCGGFVLGVNLNHCMDDGISAMQFVNTWGETARGLDLSISPVLDRTILSARNPPKIEFPHHEFDEIEDVSNATKLYEEEEILYKSFCFDPDKLELLKKLATEDGAVKKCSTFEALTAFVWRARSEALSLNPNQQTKLLFAVDGRSKFVPQIPKGFFGNAIVLSNALCNVGELVNNPFSFTVGLVGKAIEMVTDSYMRSAIDYFEVKRSRPSLTATLVITTWTRIPFHNADFGWGKPFFFGPVTLPGKEVILFLSPSDEESKSINVLLGLPASAMKRFERLMQI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2237 432 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 10 431 - -
Aed5g2237 432 Pfam Transferase family 8 428 - -
Aed5g2237 432 Gene3D - 3 214 IPR023213 -
Aed5g2237 432 Gene3D - 215 431 IPR023213 -
Aed5g2237 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2237 Aed-Chr5 24353709 24356347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2237 7 430 Monolignol Biosynthesis Gene Families AT5G48930 38.041 6.05e-97 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2237 K15400 - gmx:100775546 747.273