Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2226 ATGGGTTGCGCGCTCGGAAAGCCAGCGGTCCCCGGCGACCGTCGCCGGCATAACACTGCAGCCAGTGGCGGCAATGATGTCGCTAAGGTTCGGGAGAAGCAGAAGCCTCCGCACGCCGGCGAACATTCCGGCGTGATTCCGGCGCCGGAGAGCCGGAGACCTTGCCTTGACTCATTCACGGCGAGGCACCAGGGGTGGCCGCCGTGGCTAATGGCCGTCGCCGGCGACGCTATCGGAGATTGGACTCCTCGCCGTGCCAACACATTCGAGAAGCTTGCTAAGGCAGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTGTTTTGAGGAAGCTCGATCACCCCAATGTTGTGAAACTTGAAGGGTTGGTTACTTCAAGAATATCATCGAGTATTTACTTGGTATTTGAGTACATGGAGCATGATCTTGCTGGTCTTTCAGCTGGTGTAGGTGTCAAATTCTCTGAGCCACAGGTGAAATGCTATATGAAGCAATTGCTATCTGGTCTTGAGCATTGCCACAGTAGAGGTGTTTTGCACCGCGATATTAAGGGTTCCAATCTGCTTATTGACAATGAAGGAATACTTAAAATTGCAGATTTTGGACTGGCAACTTTCTATGATCCTAAGCAAAAGAAGCATCCCATGACTAGTAGAGTCGTGACCCTTTGGTACCGTCCCCCTGAGCTTCTTCTCGGCTCTACATCCTATGGTGTTGGTGTTGACCTTTGGAGTGTTGGCTGCATTTTGGCAGAGCTACTTGCCGGAAAGCCAATCATGCCTGGCCGAACAGAGGTTGAGCAGCTGCATAAAATATTTAAGTTATGTGGCTCTCCATCTGAAGAATACTGGAAGAAATATAGATTGCCAAATGCTACACTCTTTAAGCCACAGCAACCATATAAAAGAAACATCTTAGAAACGTTCAAGGATTTTCCATCTTTTTCATTACCTCTGATTGAAACTCTTCTTGAGATAGATCCTGATGATCGTGGCACTGCCTCAGCTGCTCTAAATAGTGAAGTGAGTGATCACTGTGGATTAGCATTATATTTGAGATGTAATTTCTTTACCACCGAGCCCTATGCTTGTGAACCATCTAGTTTACCAAAGTATCCTCCCACCAAAGAATTGGATATAAAACTGAGAGATGAAGAAGCAAGAAGGCAGAAAGCTTCAAGTGGAAAAACTAATGCAGTTGATGGTGCCAGAAGAGTAAGAGTACGCGAGCGTGGTTTGGTCATTCCAGCCCCTGAAGCCAATGCAGAGATCCAAAATAACTTAGATAGGTGGAGAGTTGTGACCCATGCAAATGCAAAAAGTAAGAGTGAGAAATTTCCACCTCCTCATCAGGATGGAGCTGTTGGATATCCACTGGATGCATCAAACAAAGGAGCAGTTTCATTTGGAGCCACTGAAACATCTTCCTCTGCCTCTACCATTTTTGATTCAAAATCAAAATCTTCTATTAGTCTTGATGCTGCCAGAGACAGAGGGAGGAAAACTAGTAAAGCAGATTCTTCCCAGAGGGCATCATCATCATCATCTTGGAAATTTATGCGTTCATTCAAGCTATCAGCAATTGGCCATTCATTTGATTTATTATTTAGAAGCAATTCAAGCAAATAA 1626 0.4563 MGCALGKPAVPGDRRRHNTAASGGNDVAKVREKQKPPHAGEHSGVIPAPESRRPCLDSFTARHQGWPPWLMAVAGDAIGDWTPRRANTFEKLAKAESVKFMAREILVLRKLDHPNVVKLEGLVTSRISSSIYLVFEYMEHDLAGLSAGVGVKFSEPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYDPKQKKHPMTSRVVTLWYRPPELLLGSTSYGVGVDLWSVGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRNILETFKDFPSFSLPLIETLLEIDPDDRGTASAALNSEVSDHCGLALYLRCNFFTTEPYACEPSSLPKYPPTKELDIKLRDEEARRQKASSGKTNAVDGARRVRVRERGLVIPAPEANAEIQNNLDRWRVVTHANAKSKSEKFPPPHQDGAVGYPLDASNKGAVSFGATETSSSASTIFDSKSKSSISLDAARDRGRKTSKADSSQRASSSSSWKFMRSFKLSAIGHSFDLLFRSNSSK 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2226 541 MobiDBLite consensus disorder prediction 487 516 - -
Aed5g2226 541 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 61 94 - -
Aed5g2226 541 PANTHER CELL DIVISION PROTEIN KINASE 61 94 - -
Aed5g2226 541 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 95 513 - -
Aed5g2226 541 MobiDBLite consensus disorder prediction 1 53 - -
Aed5g2226 541 MobiDBLite consensus disorder prediction 438 458 - -
Aed5g2226 541 MobiDBLite consensus disorder prediction 489 504 - -
Aed5g2226 541 SUPERFAMILY Protein kinase-like (PK-like) 94 339 IPR011009 -
Aed5g2226 541 Pfam Protein kinase domain 98 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2226 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Aed5g2226 541 PANTHER CELL DIVISION PROTEIN KINASE 95 513 - -
Aed5g2226 541 Gene3D Transferase(Phosphotransferase) domain 1 145 395 - -
Aed5g2226 541 SMART serkin_6 89 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2226 541 Gene3D Phosphorylase Kinase; domain 1 85 144 - -
Aed5g2226 541 ProSiteProfiles Protein kinase domain profile. 31 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2226 Aed-Chr5 24280029 24284118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2226 103 393 Core Cell Cycle Gene Families AT5G10270 48.366 7.58e-94 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aed5g2226 Pkinase 1.4e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2226 K08819 - gmx:100789359 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2226 5 24280029 24284118 Aed5g2226 5 24280029 24284118 ECH