Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2221 ATGGCTCCCTCTGACCAATCTCGCCACTCTCTTGTCCCGGGATTCTTGTACTCATCAAAAACACTGTCCCATTTGAATAATAATAATAATAAGAAGAATAACACCAATCATCATCATGTGTTGCCGCCGCCGCCATCATCATCATCATTGTCACAGCAGGGTGGGACCAAGAGTCCTATGATCCTTTCACCCAAAGAGGGAATTCGCTTGTTTTCTCCTGCTTACTATGCCGCATGCAGTGCTGGTGGCATCTTCAGCTGTGGCCTTACCCACATGGCTGTCACTCCTCTCGACCTTATCAAGTGCAACATGCAGATTGATCCTATAAAGTACAAGAACATCTCATCAGGATTTGGAGTGTTACTGAAGGAACAGGGCGCAAAAGGTTTCTTCAGGGGATGGGTGCCTACTCTGCTAGGCTACAGTGCTCAAGGAGCATGCAAGTTTGGGTTTTATGAGTTCTTCAAGAAGTACTACTCAGACCTTGCAGGACCCGAGAATGCAGCCAAGTACAAAACATTCATCTTTCTTGCTGGTTCTGCTTCTGCAGAAGTTATTGCTGATGTTGCCCTTTGCCCCATGGAGGCTGTCAAAGTTCGTGTTCAAACTCAGCCCGGCTTTGCTCGAGGTTTGTCGGATGGCTTACCCAAGTTTATCAAGGCTGATGGTGTTTCAGGGTTGTATAGAGGGCTCGTCCCTCTTTGGGGCCGTCAAATTCCATACACGATGATGAAATTTGCTTCGTTTGAGACAATTGTGGAGATGATTTACAAATATGCTATCCCAATCCCTAAGCATAAGTGCAGCAAAACTAAGCAGCTTGGAGTGAGTTTTGCAGCTGGATATATAGCAGGCGTGCTGTGTGCAATTGTCTCACACCCTGCTGACAACCTCGTTTCTTTTCTCAACAATTCAAAGGGAGCCACTGTTGGTGATGCTGTGAAGAAGATTGGAGTAGCAGGTCTTTTCACTCGTGGCCTTCCACTTCGTATAGTTATGATTGGAACACTAACTGGAGCCCAGTGGGGACTCTATGATTCATTTAAAGTATTTGTAGGGCTGCCTACTACTGGAGGAAGTGTTCCTGCTCCTGCTCCTGTTAAGTAG 1107 0.4634 MAPSDQSRHSLVPGFLYSSKTLSHLNNNNNKKNNTNHHHVLPPPPSSSSLSQQGGTKSPMILSPKEGIRLFSPAYYAACSAGGIFSCGLTHMAVTPLDLIKCNMQIDPIKYKNISSGFGVLLKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAAKYKTFIFLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFIKADGVSGLYRGLVPLWGRQIPYTMMKFASFETIVEMIYKYAIPIPKHKCSKTKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNSKGATVGDAVKKIGVAGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSVPAPAPVK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2221 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 272 351 IPR018108 -
Aed5g2221 368 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 365 IPR044677 GO:0005315|GO:1990547
Aed5g2221 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 158 IPR018108 -
Aed5g2221 368 Pfam Mitochondrial carrier protein 177 259 IPR018108 -
Aed5g2221 368 Pfam Mitochondrial carrier protein 77 160 IPR018108 -
Aed5g2221 368 MobiDBLite consensus disorder prediction 23 58 - -
Aed5g2221 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 255 IPR018108 -
Aed5g2221 368 Gene3D Mitochondrial carrier domain 75 352 IPR023395 -
Aed5g2221 368 PANTHER PHOSPHATE CARRIER PROTEIN 1 365 - -
Aed5g2221 368 SUPERFAMILY Mitochondrial carrier 76 346 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2221 Aed-Chr5 24240809 24244309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2221 5 365 Chloroplast and Mitochondria Gene Families AT5G14040 73.784 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2221 K15102 - gmx:100800530 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2221 5 24240809 24244309 Aed5g2221 5 24240809 24244309 ECH