Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2219 ATGATGAACTTGCCAACATGGAAAACCATGGCAATGACTGTGGTGTTGCTTCAGCTGAGCTTTTCCTTGGAGATTTTCTGTCTCTCTTATCATGCAGATAGAATTGTTCGGCTTCCAGGACAACCAAATATAGGCTTCCAGCAGTTCTCAGGATATGTTACAGTGGATGATGACATGAAACACAAGGCTCTCTTTTACTATTTTGTTGAATCAGAAACTGATTCAGCTTCAAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTTGGAGTGGGTGCATTCTCTGAAAATGGACCTTTTAGACCAAATGGAGAAGTTCTGATTGAAAATGAGTACAGTTGGAACAGAGAGACAAACATGTTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTGGCTCCTCCTATGAGAATGTGAATGATGAGACAACAGTACTTTTGATTTCTCAAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAATTCCCTCATTATAGACACAGAGATTTGTTTCTAGCAGGTGAAAGTTACGCAGATTCAACGTACAAATTGTTCACTACAGGTTGTAACTATTCCCGATATGTCAGTGAATACTATAGAGACTCAATTTCGCCGCTTTGTTCAAAGGTTATGAGGCAAGTAAGCAGAGAAACCAGTAAGTTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCCTCAGTGCTTTCACAATCCAAACCTATTTGGCCACAAGGTCAACAAACAAATGAGAGCATAGATGTATGTGTAGATGACAAAGTTACAAATTACTTAAACCGAAAAGATGTACAAGAGGCCCTCCATGCCAAGCTTGTTGGAGTTCGAAAGTGGGATGTTTGCAGCAATAACAGCATTCTGGACTATGACATGCTTAACTTGGAGGTACCTGCTCTCCCTGTTGTTGGAGCACTCATAAAAGCTGGAATTCGGGTCCTAATTTACAGCGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGTCGCACCTTGGTTCAAAAGCTAGCTAGACAACTAAGACTGAATACAACAGTCCCTTATAGAGTATGGTTTGAAGGCCACCAGGTTGGTGGGTGGACTCAAGTTTATGGCAATATCCTCTCATTTGCTACTGTCAGAGGTGCCTCCCACGAAGCCCCTTTCTCACAGCCTGAAAGATCACTTGTTTTGTTTAAGTCATTCTTGGAAGATAGGCCACTACCTGAAATTTTCTGA 1269 0.4192 MMNLPTWKTMAMTVVLLQLSFSLEIFCLSYHADRIVRLPGQPNIGFQQFSGYVTVDDDMKHKALFYYFVESETDSASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIENEYSWNRETNMLYLETPVGVGFSYAKGGSSYENVNDETTVLLISQARDNLVFLQRWFNKFPHYRHRDLFLAGESYADSTYKLFTTGCNYSRYVSEYYRDSISPLCSKVMRQVSRETSKFVDKYDVTLDVCISSVLSQSKPIWPQGQQTNESIDVCVDDKVTNYLNRKDVQEALHAKLVGVRKWDVCSNNSILDYDMLNLEVPALPVVGALIKAGIRVLIYSGDQDSVIPLTGSRTLVQKLARQLRLNTTVPYRVWFEGHQVGGWTQVYGNILSFATVRGASHEAPFSQPERSLVLFKSFLEDRPLPEIF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2219 422 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 189 IPR001563 GO:0004185|GO:0006508
Aed5g2219 422 PANTHER CARBOXYPEPTIDASE 28 189 - -
Aed5g2219 422 Pfam Serine carboxypeptidase 42 189 IPR001563 GO:0004185|GO:0006508
Aed5g2219 422 Pfam Serine carboxypeptidase 215 414 IPR001563 GO:0004185|GO:0006508
Aed5g2219 422 ProSitePatterns Serine carboxypeptidases, histidine active site. 385 402 IPR033124 GO:0004185
Aed5g2219 422 Gene3D alpha/beta hydrolase 192 418 IPR029058 -
Aed5g2219 422 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 189 420 IPR001563 GO:0004185|GO:0006508
Aed5g2219 422 SUPERFAMILY alpha/beta-Hydrolases 36 419 IPR029058 -
Aed5g2219 422 Gene3D alpha/beta hydrolase 29 191 IPR029058 -
Aed5g2219 422 PRINTS Carboxypeptidase C serine protease (S10) family signature 385 398 IPR001563 GO:0004185|GO:0006508
Aed5g2219 422 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Aed5g2219 422 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Aed5g2219 422 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Aed5g2219 422 PANTHER CARBOXYPEPTIDASE 189 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2219 Aed-Chr5 24232284 24235221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2219 276 418 Calmodulin-binding Proteins AT2G22960 28.671 4.65e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2219 K16297 - gmx:100800002 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2219 5 24232284 24235221 Aed5g2219 5 24232284 24235221 ECH