Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2218 ATGTGGGAGTGGACATTGCAGGGATTGGAACTCCATAGTGACGACGAGTCTGAGGCCCCATTGCCTCTCACTGTGACTTCTCGGGTTTTGTATATGTTGGAAGATATCACTGCAGGGCCTGCGTTTAGGTTCACGCAATGGCTCCAATTGGTTCGTAAACGCACTGCAAAGTATAGTTCTTCTGGCTTCCCTTACCGCACTTCCACCACCACCATGCCTTCTACCTCTTGCATCAGAGAATCGTTGGAGAATCTAAAATTGAACCTGCATCCTGATCAAACAGAACTTAGCTTGTGGGAGAGGCTTGGGAAGGCTGCAATGTTGGAAAATGAATCAGACTCCTTTTCCTGGGACATGCTCTCTTCACTGCACCACACTGAACACAGCAGTAGCAATGAACATTCTGAGGACGAGATGAACAAAGCTCTCGAGGGTAGAGTCATTCACAATACCAGTTTAGAATGGCAACAAATAAAGGAAGCTACAGAAAAAGCTAGAGAAGCAGCAAATTCTGAGGGTGATGAAATTGGGGAAGTGACATGTTTTGAACTTTTGGAAGCACTTGAGCTTAGCCGATGTCTCTTTTTTATGAGTTACGTACATGGTTCACCACTGCTTGAAAACACTAGTGCATTTGAGTCAAAGGAATCTGCAGAAAGAACATCAGAAGCTCTTGGCAGGGTACTGTTGCTGGACCTTGTCATCAGAAATGAAGATAGACTTCCTTGTCGTGAGCTTAGATGGCGAGGAAATCCTGCAAATTTGTTGTTGGCTGGAAAGACTACCTGTACAAATACAGATGCACTAGAAGCAGCTTTTGATTCTGCAGTTAACCGATATAGACCAAAGGTGATTAGGGCATTTCGGAAAGAAAGAAGGTCAACTTCAGTAGATTGCAAACTCAATTCTCCCATATCACAATCTACTGATAATCTCTCAGACATCACAGAATCACCAAGGTCTCCTGACATGATCCTTCAAACATCAGGAGAATCACTGTCTCCTGAAGTTAACATTGTAGCCATTGATTCTGTTGTTCCTCGGCGACCTCCTGCTGGAAAACGTGCAAATGATCAGGTTAATTATCCTAAGTTGGTTGAGCTGCTAGTCAATAGTTCTGAATTTTCCTCAAACCTGTTATATGATATAACTGGAGGGAAATTAGGATGTCCCCCACCAGAAGACATGGAAAAAACTGATGTACATATATGTGATACAATGTTTTTAGTTCATGCATTCCGTAATGGTTTCCGTGCTGCTCTTAGGGATCTGCAGGGATTCCATATATTCCTACTCACACTTCACCAACGACTTGATACTTTGTTACGATCATTTATGAACATTATAAGCAAAATATCTTTGGGGGAATTTGACAAAGAAGATTCTGTGGTTCCTGACTCACCTTCACTGACCGTTGGCGGGAGTTGTTCTTCTCCAACATGTAAGGAAAGGCTTGCTAATGATAACCATCACTATTTTAGTGATTCCGAATCACATAGAACTGCTTCAAGAGCATCATCTTCAGGCAATAGAGATTGCACTGACTCTACTCCTATGTCAAGAGAAACTTGGCATGGAAAGTTTTATAAAGGAAATGGGGAACCACTCCGTAGTCTCCGTTTGACTGCTAAGCTCCGTGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCCCATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAGTGATGCCATCAAACTATGTCAGGAGAACAACTTCAACCCAGGATTTTTTGAGGGTAGTGATCATAATTGTGTCGTTGATGCATATGAACTTAAGGTCAGACTTGAGCATATTCTCGAGAGAATTGCATTGATATCAGAAGCTGCAAGTTCTGAGAAACCTTCAGCAATGACAAGTGGTCTGTTCATTGGTGGAGCACTGGCTGCAAGATCGGTATACACACTGCAATACTTGGGAATCACAAATATTTTGTGTTTGTGTACCAATGAAATTGGACAGTCAGAAACTCAGTATCCTGATCTATTTGAGTACAAGAATTTCTCTGTATGTGACAATGATGATTATAACATCAGCACCATATTTGAAGAAGCGTGTGATTTTATAGACTATGTTGAACAAAAAGGTCAAAAAGTTTTAGTTCATTGCTTTGAGGGGAGAAGCAGAAGTGTCACGTTGGTCCTCGCTTACTTCATGCTCAGGAAGAAGTATACTTTATTAGAAGCATGGCAAGCTCTGAAACGAGTTCACCGTCGAGCACAACCCAACGACGGTTTTGCAAAGATCTTGTTAGAATTGGATCAGAAACTACATGGAAAGGTTTCGATGGAATGGCAACAGCGGAGACCAGTGATGAAAGTCTGCCCCATATGTGGGAAGAATGCTGGACTAAGCAGCAGCTCACTTAAACTACATCTGCAGAAATCACATAGAAAGCTATCATCTGGGAGTGTAGATAGTGCCATGACTATGGAAATCCAGAAAGCTTTAACAGCTTTGAAGATTAGCCGTGGTGGGAGTGTCAGCCCCACACAAAGATCCTCCTCTCGTCCACTAATAGATCTAGAAACTGCAAATTCATAG 2571 0.4208 MWEWTLQGLELHSDDESEAPLPLTVTSRVLYMLEDITAGPAFRFTQWLQLVRKRTAKYSSSGFPYRTSTTTMPSTSCIRESLENLKLNLHPDQTELSLWERLGKAAMLENESDSFSWDMLSSLHHTEHSSSNEHSEDEMNKALEGRVIHNTSLEWQQIKEATEKAREAANSEGDEIGEVTCFELLEALELSRCLFFMSYVHGSPLLENTSAFESKESAERTSEALGRVLLLDLVIRNEDRLPCRELRWRGNPANLLLAGKTTCTNTDALEAAFDSAVNRYRPKVIRAFRKERRSTSVDCKLNSPISQSTDNLSDITESPRSPDMILQTSGESLSPEVNIVAIDSVVPRRPPAGKRANDQVNYPKLVELLVNSSEFSSNLLYDITGGKLGCPPPEDMEKTDVHICDTMFLVHAFRNGFRAALRDLQGFHIFLLTLHQRLDTLLRSFMNIISKISLGEFDKEDSVVPDSPSLTVGGSCSSPTCKERLANDNHHYFSDSESHRTASRASSSGNRDCTDSTPMSRETWHGKFYKGNGEPLRSLRLTAKLRDFHKFAKVDAESHKELEQWNEMLKSDAIKLCQENNFNPGFFEGSDHNCVVDAYELKVRLEHILERIALISEAASSEKPSAMTSGLFIGGALAARSVYTLQYLGITNILCLCTNEIGQSETQYPDLFEYKNFSVCDNDDYNISTIFEEACDFIDYVEQKGQKVLVHCFEGRSRSVTLVLAYFMLRKKYTLLEAWQALKRVHRRAQPNDGFAKILLELDQKLHGKVSMEWQQRRPVMKVCPICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRSSSRPLIDLETANS 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2218 856 MobiDBLite consensus disorder prediction 492 519 - -
Aed5g2218 856 ProSiteProfiles Dual specificity protein phosphatase domain profile. 623 768 IPR020422 GO:0006470|GO:0008138
Aed5g2218 856 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 692 744 IPR000387 GO:0016311|GO:0016791
Aed5g2218 856 Pfam Dual specificity phosphatase, catalytic domain 644 764 IPR000340 GO:0008138|GO:0016311
Aed5g2218 856 Gene3D Protein tyrosine phosphatase superfamily 606 778 IPR029021 -
Aed5g2218 856 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 10 144 - -
Aed5g2218 856 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 145 850 - -
Aed5g2218 856 SUPERFAMILY Protein kinase-like (PK-like) 46 359 IPR011009 -
Aed5g2218 856 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 10 144 IPR035010 GO:0004721|GO:0009737|GO:0043622
Aed5g2218 856 MobiDBLite consensus disorder prediction 499 519 - -
Aed5g2218 856 MobiDBLite consensus disorder prediction 833 856 - -
Aed5g2218 856 SMART dsp_5 623 765 IPR020422 GO:0006470|GO:0008138
Aed5g2218 856 Gene3D - 204 318 IPR036940 GO:0016301
Aed5g2218 856 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 623 768 IPR029021 -
Aed5g2218 856 Pfam Actin-fragmin kinase, catalytic 144 315 IPR015275 -
Aed5g2218 856 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 145 850 IPR035010 GO:0004721|GO:0009737|GO:0043622
Aed5g2218 856 CDD DSP 624 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2218 Aed-Chr5 24217738 24225893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2218 15 834 Protein tyrosine phosphatase (PTP) family AT5G23720 58.679 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2218 K14165 - gmx:100791993 1269.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2218 5 24217738 24225893 Aed5g2218 5 24217738 24225893 ECH