Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2211 ATGTATCAGTATCACCCTAATCTCAAAGTCCCCACCAGTGGCGCACACAAAAAAAAAAAGTGTGTGATGATGGCACAAGATTCAGTAGAGAAAGTTTGTGAAATAGTAGTAGGTGCTGCCGAGTCTCCAACCACCCCAGTTGGAATTAGACAAGCACAAACAGAGACAGAGAGTGAACCCAAAAGCACACCAAGAATCAAAGCCACAAGGCACCCCAGATGGACGAGGCAAGAAACACTTGTTCTGATAGAGTCCAAGAAAATGGTGGAAAACGGAGAACAAGTTTGCCGATTCAGATCAGCATCTGGGTACGTTCAAACCGATCCAAAATGGGACATGGTTTCGTCACTGTGCCAGCAGAGAGGGGTGAAGAGAGGCGCTGTTCAGTGCAGGAAAAGATGGGGCAATCTTCTCACTGATTTCAGGAAGATCAAGAAGTGGGAATCGGGCACGAAGGAGGAGAGTGAGTCGTTTTGGATCATGAGGAATGATGTTAGGAAGGAGAAGAAGCTTCCCGGGTTCTTTGATTCTGTGGTGTACAATGTGTTGGATGGAGGGGTGTGCACCACTGTTGCGTTTCCTTTGACACTGGTTAAGATGGTGCCAAAAGTGGAGAATAATGGTGTTGGTGTTGTTGCTCATCAGGAACAATGTAAGGAGAATGAGGATCAGGAAGAGGAGGAGGATGATGAAGATGAGGCCATTGTTGATAGTGAGGAGGAAAACACGGAGACTAACAAAACTGCTGCAAATATGGTCAATGGCTTTCTCAAAACACCAACAACAACAACAGGTCTTAAGGAGAAAGGCATGACCACAGGGAGTCTCAGAAAGATACCCATACTCACACTCCCTACTCCAGGGCTTCAGAGGGAACCTATGTTCCACCACCAGGAGGGATACAAGAGAAAGAGGTTATCATCGGAGAGCAGTGAGGACAGCACAGATTTCAACAACAATATTACCAAACTACTAAGGAGGAATAGTGACATGCTAAAAGCCCATCTTGGGGCTCAGAACATAAATTACCAATTGGCCAGAGACCAGCAGAAGCAGCAAACTGATATTTTAGTTGCAGTCCTTGGAAAGCTCACGGATGCTCTCACAAAAATTGCTGACAAGCTGTAA 1128 0.4583 MYQYHPNLKVPTSGAHKKKKCVMMAQDSVEKVCEIVVGAAESPTTPVGIRQAQTETESEPKSTPRIKATRHPRWTRQETLVLIESKKMVENGEQVCRFRSASGYVQTDPKWDMVSSLCQQRGVKRGAVQCRKRWGNLLTDFRKIKKWESGTKEESESFWIMRNDVRKEKKLPGFFDSVVYNVLDGGVCTTVAFPLTLVKMVPKVENNGVGVVAHQEQCKENEDQEEEEDDEDEAIVDSEEENTETNKTAANMVNGFLKTPTTTTGLKEKGMTTGSLRKIPILTLPTPGLQREPMFHHQEGYKRKRLSSESSEDSTDFNNNITKLLRRNSDMLKAHLGAQNINYQLARDQQKQQTDILVAVLGKLTDALTKIADKL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2211 375 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 55 375 - -
Aed5g2211 375 ProSiteProfiles Myb-like domain profile. 73 138 IPR001005 -
Aed5g2211 375 Gene3D - 74 143 - -
Aed5g2211 375 MobiDBLite consensus disorder prediction 221 239 - -
Aed5g2211 375 Pfam Myb/SANT-like DNA-binding domain 72 161 IPR044822 -
Aed5g2211 375 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 55 375 - -
Aed5g2211 375 MobiDBLite consensus disorder prediction 44 68 - -
Aed5g2211 375 Coils Coil 221 241 - -
Aed5g2211 375 MobiDBLite consensus disorder prediction 215 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2211 Aed-Chr5 24157268 24159077 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2211 73 153 Trihelix Transcription Factor Family AT5G03680 32.927 1.51e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2211 - - gmx:100793052 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2211 5 24157268 24159077 Aed5g2211 5 24157268 24159077 ECH