Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2188 ATGTTTTGTAATTCGTTCGAAGTAACGTTAGCTTCCGAGGTCGCTGGAATGCAGCTGATTGAGTTTACTAAAGACGTGAAGGACCAACAAAGCACCTTGTCATCAAGGATGGGTCATTTGGGTGTTTGTCATCAAGTCAGGTTCATTGGTCAGCATGAGGAATATGGAAATCGACTTTCTTCCAGCATTCCTACGGTAGAGGGATCAAAAGATAAGGGAAAAATCATTAAAGTTAAACCTATCTTCATGCCAAAATTTAAGAAAAGAAAACGCCTCAGCCTTAATCGTCTTAGAGAGATTAAAGCAGATATGTGTGCGAAGCAAAGTAGTGACACACCTAAAACAAAGAAGTGTGAAAGCATAGACAGATGGTCGGCTAAGAGGTATGAGTTGGCTCAGCAAAGCATGTGGGAGGTCTTAAAAGGTGAAGGTGCAACTTTTGAAAATCCTATTACCCGACTTGCACTGAGAATGGCTGCCCTTAAACACATTGGTGATACTGGACTATTAGACCACTTACTAAAGCACATTGATGGTAAAGTAGCACCTGGAGGAACTGAGCGGTTCCGACGATGTTTCAACACCAAGGGAATCATGGAGTATTGGTTGGAGAGTGCTAATTTGGATGAAATTCGTCGGGAGACTGGGGTGCAAGACCCTTACTCCATACCACCGTCTACATTTAGGGCAGGCAGTGTTCCTACTCAGAATACTGATTTTATTGGTGAAGTGAAAATGCTTAAAACAGAAATGGCCCAGATGAAGAAAGACATGCAAGAGCTCATTGCCAAGAAGCAAAAAAAAAGGGAAACGTGTTTGATGGAGGAGACACAGAAAAGTTTTGTGAATTGGAAAGCTATGACTGAGCAGCGTGTAACTGAGATTATGACTTCTTTGAAGGGTGTGCAGGGCATGCATGAAAACATGTTGATTTGGAAATCTAAAGTTGAGCAACAGCTACTGGAAATAACCAATAAATTGAATGATGTGCAAAAATTGAGAGAACACACCACTTCAACTTATCCTCCAGCAAGCTGGGAGGATTGGCTAGACAGCACCAACATAGACAATATTCAGGGAAACGAACTTGCACCTTGGTTTGGGAATCCTGAGCTGCTTAATTTTCCACCAGAGGTTGTACTACAAGATCCGAACTCAACCCTACCAACTCAGTTGGACAGTGAAATGTTCATGGAATTATTTACATCGAAGGATAAAATGGAGCAGCGGTTATTGGAGATATCAAATATTGTATATGGCATGCTGGCAATGAAATAG 1278 0.4163 MFCNSFEVTLASEVAGMQLIEFTKDVKDQQSTLSSRMGHLGVCHQVRFIGQHEEYGNRLSSSIPTVEGSKDKGKIIKVKPIFMPKFKKRKRLSLNRLREIKADMCAKQSSDTPKTKKCESIDRWSAKRYELAQQSMWEVLKGEGATFENPITRLALRMAALKHIGDTGLLDHLLKHIDGKVAPGGTERFRRCFNTKGIMEYWLESANLDEIRRETGVQDPYSIPPSTFRAGSVPTQNTDFIGEVKMLKTEMAQMKKDMQELIAKKQKKRETCLMEETQKSFVNWKAMTEQRVTEIMTSLKGVQGMHENMLIWKSKVEQQLLEITNKLNDVQKLREHTTSTYPPASWEDWLDSTNIDNIQGNELAPWFGNPELLNFPPEVVLQDPNSTLPTQLDSEMFMELFTSKDKMEQRLLEISNIVYGMLAMK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2188 425 PANTHER DYAD PROTEIN 38 386 - -
Aed5g2188 425 PANTHER PROTEIN DYAD 38 386 IPR044221 GO:0007131|GO:0051177|GO:0051321
Aed5g2188 425 Coils Coil 244 271 - -
Aed5g2188 425 Coils Coil 313 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2188 Aed-Chr5 23987300 23991755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2188 120 204 PHD Transcription Factor Family AT5G22260 41.111 3.67e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2188 - - gmx:100792586 601.668