Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2186 ATGATACTTTACACACGTCATTCCCAGTTCCAAGTAGCATATTATATAATAAGAAGATCTAAATGTCCGTTCAACATACAGCTGCATATCATGGAGAGGAAAACACTTGAGATTTTGTTCATGATCGTCCTTGTCTTTGCTGCTGATGTGGCGGTGAAGAGAGCAGAGGGGAGAGATTGCTTGTCAAAAAGCCACGGATTCAAGGGTGCATGCTTTAGCGACACCAACTGTGCACATGTATGCAAGATCGAAGGTTTCACCGGTGGCGACTGCAGAGGATTCCGCAACCGCTGCTTTTGCACCAGGATTTGTTGA 315 0.4508 MILYTRHSQFQVAYYIIRRSKCPFNIQLHIMERKTLEILFMIVLVFAADVAVKRAEGRDCLSKSHGFKGACFSDTNCAHVCKIEGFTGGDCRGFRNRCFCTRIC 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2186 104 Pfam Gamma-thionin family 60 104 - -
Aed5g2186 104 PRINTS Purothionin signature 89 103 IPR008176 GO:0006952
Aed5g2186 104 PRINTS Purothionin signature 59 74 IPR008176 GO:0006952
Aed5g2186 104 ProSitePatterns Gamma-thionins family signature. 58 81 IPR008176 GO:0006952
Aed5g2186 104 PANTHER DEFENSIN MTDEF4.7 31 104 - -
Aed5g2186 104 CDD Knot1 69 101 IPR003614 GO:0006952
Aed5g2186 104 SUPERFAMILY Scorpion toxin-like 59 104 IPR036574 -
Aed5g2186 104 PANTHER DEFENSIN-LIKE PROTEIN 1 31 104 - -
Aed5g2186 104 Gene3D - 58 104 IPR036574 -
Aed5g2186 104 SMART gth_4 59 104 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2186 Aed-Chr5 23968434 23970165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2186 38 104 Plant Defensins Gene Families AT2G02120 55.224 3.86e-22 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2186 - - gmx:102666433 121.324