Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2185 ATGGAGAGGAAAACATTCGGGTTTTTGTTCTTGCTCCTCCTTGTCTTGGCTGCAGATGTGGGTGTGAAGACAGCAGAGGCGAAGGATTGCCTTTCAAGAAGGCACGGGGTTAGGGGTAATTGCGTAACCGACTGGGACTGTGCACATACCTGCAGGAAAGACGGTTTTGTCGGTGGCGAGTGCCAAGGCGTCCGTCGCCGCTGCTTTTGCTCAAGGAAATGTTGA 225 0.5289 MERKTFGFLFLLLLVLAADVGVKTAEAKDCLSRRHGVRGNCVTDWDCAHTCRKDGFVGGECQGVRRRCFCSRKC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2185 74 Pfam Gamma-thionin family 30 74 - -
Aed5g2185 74 Gene3D - 28 74 IPR036574 -
Aed5g2185 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Aed5g2185 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Aed5g2185 74 SUPERFAMILY Scorpion toxin-like 29 74 IPR036574 -
Aed5g2185 74 Coils Coil 74 74 - -
Aed5g2185 74 SMART gth_4 29 74 IPR003614 GO:0006952
Aed5g2185 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
Aed5g2185 74 PANTHER DEFENSIN MTDEF4.7 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2185 Aed-Chr5 23967620 23968249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2185 9 74 Plant Defensins Gene Families AT2G02120 45.455 7.07e-19 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2185 - - gmx:100306228 106.301