Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2183 ATGGATAAGTATGAGGCTGTCAAGGATTTGGGGGCTGGGAATTTTGGGGTGGCTAGGCTCATGAGGAATAAGGAGACCAAGGAGCTTGTTGCCATGAAATACATCGAGCGTGGCCAAAAGATTGATGAGAATGTGGCAAGAGAGATTATCAACCACAGATCCCTTCGACACCCCAATATAATTCGCTTCAAGGAGGCAAGGACCTTATTTGCTAGATATTTCTTTCAGCAGCTGATTTCTGGTGTACACTACTGTCATGCCATGCAAATATGTCACAGAGATTTGAAGCTAGAAAATACCCTTTTAGATGGAAGCCCTGCACCCCGCCTGAAAATTTGTGACTTTGGTTATTCCAAGTCATCATTGCTTCATTCACGACCCAAATCAACTGTTGGAACTCCAGCTTATATAGCACCAGAGGTTCTTTCCAGGAGGGAGTATGATGGCAAGTTGGCTGATGTATGGTCATGTGGAGTGACTCTTTATGTCATGCTGGTTGGAGCTTATCCCTTTGAGGATCAGGATGACCCTAGGAATTTTAGGAAAACAATTCAGCGTATAATGGCTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAAGACTGCAGACACCTCCTTTCTCGTATATTTGTAGCAAATCCATTAAGGAGAATCAGTCTTAAGGAAATTAAGAACCACCCTTGGTTTTTAAAGAATCTTCCAAGAGAGCTAACTGAATCAGCTCAAGCTGCCTATTACCAGAGAGGCAATCCAAGCTTTTCTGTTCAAAGTGTGGAGGAGATAATGAAAATTGTGGGAGAGGCAAGGGACCCTCCTCCAGTATCTAGGCCTGTCAAAGGTTTCGGCTGGGATGGCGAAGAAGATGAAGGGGAAGAAGATGTGGAGGAAGAGGAGGACGAAGAAGACGAGTATGATAAGAGGGTCAAAGAGGTTCATGCAAGTGGAGAGTTTCACATCAGTTAA 969 0.4365 MDKYEAVKDLGAGNFGVARLMRNKETKELVAMKYIERGQKIDENVAREIINHRSLRHPNIIRFKEARTLFARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLRRISLKEIKNHPWFLKNLPRELTESAQAAYYQRGNPSFSVQSVEEIMKIVGEARDPPPVSRPVKGFGWDGEEDEGEEDVEEEEDEEDEYDKRVKEVHASGEFHIS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2183 322 Gene3D Phosphorylase Kinase; domain 1 1 69 - -
Aed5g2183 322 MobiDBLite consensus disorder prediction 274 322 - -
Aed5g2183 322 PANTHER SERINE/THREONINE KINASE 71 315 - -
Aed5g2183 322 Gene3D Transferase(Phosphotransferase) domain 1 70 270 - -
Aed5g2183 322 MobiDBLite consensus disorder prediction 307 322 - -
Aed5g2183 322 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 66 - -
Aed5g2183 322 Pfam Protein kinase domain 72 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2183 322 Pfam Protein kinase domain 4 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2183 322 ProSiteProfiles Protein kinase domain profile. 4 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2183 322 MobiDBLite consensus disorder prediction 287 306 - -
Aed5g2183 322 Coils Coil 289 316 - -
Aed5g2183 322 PANTHER SERINE/THREONINE KINASE 2 66 - -
Aed5g2183 322 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 71 315 - -
Aed5g2183 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 90 102 IPR008271 GO:0004672|GO:0006468
Aed5g2183 322 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Aed5g2183 322 SMART serkin_6 4 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2183 322 SUPERFAMILY Protein kinase-like (PK-like) 2 262 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2183 Aed-Chr5 23952343 23957096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2183 3 234 CBL-interacting serine-threonine protein kinases AT4G24400 38.148 8.30e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aed5g2183 Pkinase 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2183 K14498 - gmx:547968 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2183 5 23952343 23957096 Aed10g0726 10 5951469 5954982 PCT