Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2180 ATGGCCTCTGCTATGGTAATGGTTCGTAGGAACATCATCACCCACTACTCCAAGTTTGCTTCTTCATGGTCTTTGTTGTCTCGCCATTCCTCAATCCACAATCACCCTCTTTCTGAGTCTGTTTCTTCATTTCACAGCCAAAGTGTTGGTGGAGGATTGCCATCTTACATGCGTGGAGCTGTGTTTTGGGAACCCAACAAGCCTCTCACCATCGAAGAATTTAACATGCCTCGCCCCAAGGCCGGTGAAGTTCTCATCAAAACCAAGGCCTGTGGAGTATGCCACTCTGATCTACATGTTATGAAAGGCGAAATTCCGTTTACCAGTCCCTGTGTTGTGGGACATGAGATTACTGGTGAGGTTGTTGAACATGGACAACTCACTGACAGCAAAACCATAGAAAGGCTTCCAGTTGGATCTCGAGTTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGAGCAAAAGGAACCCTCTACGATGGTGAAACCCGACTCTTTCTTCGAAATAGTGGAAAACCAGTATTCATGTATAGTATGGGAGGGCTTGCTGAATACTGTGTTGTGCCAGCAAATGGAGTGTCTGTAATACCAGACTCATTGCCATATACAGAGTCTGCAATTCTAGGATGTGCTGTTTTTACTGCATATGGTGCTATGGCTCATGCAGCTCAAGTGCGTCCTGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTTGGTTCTAGTTGTTTGCAGATAGCCAGAGCTTTTGGTGCCTCAGATATAATTGCTGTGGATGTACAGGATGAAAAGCTACAGAAAGCAAAGACATTTGGTGCTACTCACACTGTAAATTCAGCAAAGGAAGATCCCATTGAAAAGATACTTATACAAGTTATTGGGTCCTATGGAGGCAGGGCTAGGCAAGATCTTCCAAAGTTAATTAGACTGGCAGAAACAGGTATCTTCAATCTCAGCCATGCTGTTTCTAGAACATACACTTTTGAAGAGTCAGGAAAAGCATTCCAAGATCTCAATGAAGGAAAAATTGTCGGTCGAGCTGTCATCGAGATAATATAG 1116 0.4444 MASAMVMVRRNIITHYSKFASSWSLLSRHSSIHNHPLSESVSSFHSQSVGGGLPSYMRGAVFWEPNKPLTIEEFNMPRPKAGEVLIKTKACGVCHSDLHVMKGEIPFTSPCVVGHEITGEVVEHGQLTDSKTIERLPVGSRVVGAFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRNSGKPVFMYSMGGLAEYCVVPANGVSVIPDSLPYTESAILGCAVFTAYGAMAHAAQVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLQKAKTFGATHTVNSAKEDPIEKILIQVIGSYGGRARQDLPKLIRLAETGIFNLSHAVSRTYTFEESGKAFQDLNEGKIVGRAVIEII 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2180 371 SMART PKS_ER_names_mod 64 368 IPR020843 GO:0016491
Aed5g2180 371 CDD Zn_ADH10 57 369 - -
Aed5g2180 371 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 309 369 - -
Aed5g2180 371 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 57 307 - -
Aed5g2180 371 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 231 308 IPR036291 -
Aed5g2180 371 Gene3D - 54 370 - -
Aed5g2180 371 Gene3D - 237 319 - -
Aed5g2180 371 Pfam Zinc-binding dehydrogenase 257 307 IPR013149 -
Aed5g2180 371 Pfam Alcohol dehydrogenase GroES-like domain 82 212 IPR013154 -
Aed5g2180 371 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 309 369 - -
Aed5g2180 371 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 57 307 - -
Aed5g2180 371 SUPERFAMILY GroES-like 55 253 IPR011032 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2180 74 287 Monolignol Biosynthesis Gene Families AT4G37990 31.818 2.35e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2180 - - gmx:100802431 619.002