Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed5g2171 | ATGTTTCACCAAAATATTAGCAGGGGTCCTCTCAAAAAATTGACGAGGTGGCTCATATTCCTTACTATCTTGCAAGTTAGTTGTGCTATCAAAGAACCTGATGTAGAAGGTGTGGTAAACTTTGCTGCTATTCTTTCCTCGCCAGAAGCATATGATCAAATAAAAGACTGGGACAGTTTTTTAGTGAGCCCGTGCTTCAGTTGGTCTCATGTCACATGTAGAAACGGGCATGTCATATCCCTGGCCTTGGCTTCAATTGGATTTTCTGGAACACTCTCTCCCTCAATTACCAAATTGAAATATTTGTCTAACTTGGAATTACAGAACAACAATCTTTCAGGACCCTTGCCTGATTACATTTCCAACTTGACAGAGTTACAATATCTAAATCTTGCTGACAATAACTTTAATGGTTCTATACCAGCTAAATGGGGAGAACTATCCAATTTAAAGCATATGGATCTTTCATCTAATGGTCTTACTGGAAATATCCCAGTGCAACTCTTTTCAGTTCCATTGTTTAACTTTTCAGATACGCACCTTCAGTGTGGCCCTGGCTTTCAGCAGCCCTGCTCTTCTAAATCTGAAAATCCAGCTTCAACCCACAAATCAAAATTGGCAAAAATTGTACGTTATGCAAGTTGTGGTGCATTTGCACTTCTGTGTCTAGGTGCTATCTTTACGTATCGACACCATCAAAAGCATAGGCGCAAAAATGATGTCTTTGTTGATGTTTCAGGTGAAGACGAGATAAAAATATATTATGGGCAATTGCGAAAATTTTCTTGGCGTGAAATCCAAAATGCCACTAAGAATTTCAGTGAAGGCAATGTAATTGGTCAGGGTGGCTTTGGAAAAGTGTACAAAGGAGTACTCCCTGATAACACAAAAGTCGCTGTGAAACGCCTCACTGATTATCACAATCCTGGTGGAGAGGCTGCATTCGAAAGAGAAGTTCAACTAATAAGTGTTGCAGTTCATAGAAACCTCCTCAGACTAATTGGCTTCTGCACAACCACAACTGAAAGAATCCTTGTTTACCCTTTCATGGAAAATCTTAGTGTAGCATATCGACTGAGAGATTTAAAACCTGGGGAAAAAGGCTTAGAGTGGCCTACAAGGAAACGCGTGGCTTTTGGCACAGCTCATGGTTTGGAGTATCTACATGAGCAATGCAATCCTAAGATAATACATCGTGATCTAAAGGCTGCAAATATCCTTCTTGATGATGAATTTGAAGCTGTGCTAGGTGACTTTGGTCTGGCCAAGCTGGTTGATGCAAGAATGACTCATGTCACCACTCAAGTGCGTGGTACAATGGGTCACATTGCTCCAGAGTATTTGTCCACTGGAAAATCTTCAGAAAAGACCGATGTTTTTGGATATGGCATAACACTTCTTGAACTTGTCACCGGTGAGCGTGCAATTGACCTCTCTCGGCTTGAAGAGGACGAGGATGTTCTTCTCATTGATTATGTGAAAAAGCTGCTGAGAGAGAAGAGGCTGGAAGACATTGTGGATAGAAATTTGGAGAGTTATGATCCAAAGGAAGTTGAGACCACTCTTCAGGTTGCATTGCTTTGCACCCAAGGCTATCCAGAGGATCGTCCAACCATGTCAGAGGTGGTAAAAATGCTGCAGGGAGTGGGTTTGGCAGATAGATGGGCAGACTGGCTGCAACTTGAAGAGGCCAGGAATCAAGAACTCTCACTCATGACTCACCAATTTGTTTGGAATGATGAATCTACTCTTGATCAAGAAGCCATTCAGCTTTCCAGAGCAAGATAA | 1788 | 0.4167 | MFHQNISRGPLKKLTRWLIFLTILQVSCAIKEPDVEGVVNFAAILSSPEAYDQIKDWDSFLVSPCFSWSHVTCRNGHVISLALASIGFSGTLSPSITKLKYLSNLELQNNNLSGPLPDYISNLTELQYLNLADNNFNGSIPAKWGELSNLKHMDLSSNGLTGNIPVQLFSVPLFNFSDTHLQCGPGFQQPCSSKSENPASTHKSKLAKIVRYASCGAFALLCLGAIFTYRHHQKHRRKNDVFVDVSGEDEIKIYYGQLRKFSWREIQNATKNFSEGNVIGQGGFGKVYKGVLPDNTKVAVKRLTDYHNPGGEAAFEREVQLISVAVHRNLLRLIGFCTTTTERILVYPFMENLSVAYRLRDLKPGEKGLEWPTRKRVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDARMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGERAIDLSRLEEDEDVLLIDYVKKLLREKRLEDIVDRNLESYDPKEVETTLQVALLCTQGYPEDRPTMSEVVKMLQGVGLADRWADWLQLEEARNQELSLMTHQFVWNDESTLDQEAIQLSRAR | 595 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed5g2171 | 595 | SMART | serkin_6 | 273 | 546 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed5g2171 | 595 | Gene3D | Transferase(Phosphotransferase) domain 1 | 350 | 565 | - | - | |
Aed5g2171 | 595 | ProSitePatterns | Protein kinases ATP-binding region signature. | 279 | 301 | IPR017441 | GO:0005524 | |
Aed5g2171 | 595 | PANTHER | LRR RECEPTOR-LIKE KINASE | 16 | 595 | - | - | |
Aed5g2171 | 595 | SUPERFAMILY | Protein kinase-like (PK-like) | 251 | 547 | IPR011009 | - | |
Aed5g2171 | 595 | Pfam | Leucine rich repeat | 102 | 160 | IPR001611 | GO:0005515 | |
Aed5g2171 | 595 | ProSiteProfiles | Protein kinase domain profile. | 273 | 559 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed5g2171 | 595 | Gene3D | Phosphorylase Kinase; domain 1 | 242 | 349 | - | - | |
Aed5g2171 | 595 | Gene3D | Ribonuclease Inhibitor | 35 | 197 | IPR032675 | - | |
Aed5g2171 | 595 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 16 | 595 | - | - | |
Aed5g2171 | 595 | SUPERFAMILY | L domain-like | 51 | 171 | - | - | |
Aed5g2171 | 595 | Pfam | Protein kinase domain | 274 | 544 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed5g2171 | 595 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 396 | 408 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed5g2171 | Aed-Chr5 | 23849842 | 23855212 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed5g2171 | 18 | 595 | Receptor kinase-like Gene Family | AT5G10290 | 54.876 | 0.0 | 645 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-II | Aed5g2171 | Pkinase | 6.7e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed5g2171 | - | - | gmx:100800886 | 1096.65 |