Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2163 ATGTCCAAGCCTTCTTCGATCATAGGACGTGAAAGAGCCATTGTGGTAAACTTAGAAAATGTGAAAGGAATAATCACTGTCACAGAGGTTGTCATGATCAACTCCTCCAACCCTTTCTTTCTTAGCTTCCTTCAAGATTTTCAAAGTCGTCTAATGAACCATCAAACTCCTCCCTCCCCGATGAGCACTGACATCATGCGTGCCGGTGATGAGGACTCTGCTGATGACGCGTTACAAGCTTTAAGCCCTTCTCCAGAGACTTTAACATTGGAGGAAGAGGCTTACCCAACTTTAGATGAATTGATCACACTCAATCTTCAACATGTAAGACAAATGAAGAGTCGTTTGGTTGCACTTTCCGGTCATGTGCAGAAGCAACTGATTACCAATGATGAATCAAATTCAAAAAAGTATGCTTTTAAACCTGATGTTGAGGAATTGGAGATGCTTCTAGAAGCATATTTTGTGCAATTAAATAAAATCTTGCAAAGATTGTCAAGTTTGAGTGAATACGTGGATGTCACGGAGGACTACATCAAGATAATGTTGGATGATACTCAAAACGAGCTTCTACAGTCATCACAATAG 588 0.4031 MSKPSSIIGRERAIVVNLENVKGIITVTEVVMINSSNPFFLSFLQDFQSRLMNHQTPPSPMSTDIMRAGDEDSADDALQALSPSPETLTLEEEAYPTLDELITLNLQHVRQMKSRLVALSGHVQKQLITNDESNSKKYAFKPDVEELEMLLEAYFVQLNKILQRLSSLSEYVDVTEDYIKIMLDDTQNELLQSSQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2163 195 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 85 125 IPR039204 -
Aed5g2163 195 PANTHER MAGNESIUM TRANSPORTER MRS2-F 130 193 - -
Aed5g2163 195 Gene3D - 1 36 - -
Aed5g2163 195 Gene3D Magnesium transport protein CorA, transmembrane region 77 190 - -
Aed5g2163 195 PANTHER MAGNESIUM TRANSPORTER MRS2-F 1 65 - -
Aed5g2163 195 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 130 193 IPR039204 -
Aed5g2163 195 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 65 IPR039204 -
Aed5g2163 195 PANTHER MAGNESIUM TRANSPORTER MRS2-F 85 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2163 Aed-Chr5 23797907 23799227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2163 4 194 MRS2 Gene Family AT5G09690 34.241 6.60e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2163 - K16075 gmx:100808805 180.644