Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2162 ATGACGATTACGAGGCAGAAGAGGGTGAGAATAACCAGAATGAAGAGTTGGATGGTGGTGTCGAAGACCGGAGAGGCACACCTAGAGGATATTGAAAAACATTCCATAATGCAGCGAACAGGGATACCGTCGCGTGATCTAAGAGTTCTAGATTCAACACTGTCTGAGCCTTCTTCAATCATAGGACGGGAAAAGGCCATCGTAATGAACTTGGAAAATGTGAAAGGAATAATCACTGCCATGGAAGTTCTCATGATCAACTCCTCCAACCCTTTCTTTCTTCGCTTCCTTCAGGACCTTCAAAGTCGTCTAATGAATCATCAAACTCCTCCCTTCCCGATGAGCAATAGTATGAGCAATGACATCATGCTCGGTGACGAGGACTCTGCTGATTATGCTTTACAAGCTATAAGCCCTTCTTCAGGTCCCAAGCAGTTACCTTTTGAGTTTCGAGTACTCGAGACATGTATTGAATATGCTTGCAGCTGTCTACAATCTGAGACTTCAACATTGGAGGAAGAGGCTTATCCAGCATTAGATGAATTGACTTCTCAAGTTAGCACACTCAATCTTCAACGTGTAAGACAAATGAAGAGTCGTTTGGTTGCACTTTCCGGTCGTGTGCAAAAGGTGGCAGATGAATTGGAACATTTGCTGGATGATGATGATGACATGGCTGAAATGTACTTGACACGAAAGCTTAATGATTGTTCAATGGATCAAAGTGATGAATCAAATTCGGAAAAGTATGTTGTTAAACCTGACGTTGAGGAATTGGAGATGCTTCTAGAAGCATATTTTGTGCAGTTAAATGGAATCTTGCAAAGATTGTCAAGTTTGAGTGAGTATGTGGATGACACGGAGGACTACATCAAGATAATATTAGATGATACTCAAAACGAGCTTCTGCAGTCATCAATAATAATCAACTCCATAAACATGGAATAA 948 0.4135 MTITRQKRVRITRMKSWMVVSKTGEAHLEDIEKHSIMQRTGIPSRDLRVLDSTLSEPSSIIGREKAIVMNLENVKGIITAMEVLMINSSNPFFLRFLQDLQSRLMNHQTPPFPMSNSMSNDIMLGDEDSADYALQAISPSSGPKQLPFEFRVLETCIEYACSCLQSETSTLEEEAYPALDELTSQVSTLNLQRVRQMKSRLVALSGRVQKVADELEHLLDDDDDMAEMYLTRKLNDCSMDQSDESNSEKYVVKPDVEELEMLLEAYFVQLNGILQRLSSLSEYVDDTEDYIKIILDDTQNELLQSSIIINSINME 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2162 315 Gene3D - 3 89 - -
Aed5g2162 315 CDD Mrs2_Mfm1p-like 17 304 IPR039204 -
Aed5g2162 315 Gene3D Magnesium transport protein CorA, transmembrane region 93 302 - -
Aed5g2162 315 PANTHER MAGNESIUM TRANSPORTER MRS2-F 7 314 - -
Aed5g2162 315 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 7 314 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2162 Aed-Chr5 23793197 23795054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2162 16 314 MRS2 Gene Family AT3G19640 44.327 1.69e-95 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2162 - K16075 gmx:100808805 365.925