Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2155 ATGGGGGACGGAAGTGGGAGCCGGTGGAGCAGGGCAGAGTGGGTGCAACAGTACGATCTCTTAGGCAAAATCGGCGAAGGCACTTACGGCCTCGTCTTCCTCGCCCGAACCAAAACCCCCGCTGGCACTCCCTCCAAATCCATCGCCATCAAAAAGTTCAAGCAGTCCAAGGACGGCGACGGCGTCTCCCCCACCGCCATCCGTGAAATCATGTTGCTGAGGGAGATTACGCACGAGAACGTCGTGAAGCTCGTCAACGTTCACATCAACCACGCCGACATGTCGCTCTACCTCGCCTTCGATTACGCCGAGCACGATCTCTACGAAATTATTCGGCATCACAGGGACAAACTCAACCATTCCATTAATCAATACACTGTTAAGTCTTTGCTCTGGCAGTTGCTCAATGGATTAAGTTATCTACACAGTAATTGGATGATACATCGAGATTTGAAGCCGTCGAATATATTGGTTATGGGTGAAGGAGAGGAACATGGAGTTGTTAAGATTGCTGACTTTGGACTTGCGAGGATATATCAAGCTCCTCTGAAGCCATTATCTGAAAATGGGGTTGTTGTGACCATTTGGTATCGTGCACCTGAGTTGCTTCTTGGAGCAAAACATTATACCAGTGCTGTTGATACGTGGGCTGTGGGATGCATTTTTGCTGAGTTGTTGACCTTGAAGCCACTATTTCAAGGGGCAGAAGTCAAAGCTACATCAAATCCCTTTCAGCTTGACCAACTCGACAAGATATTTAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCAAGTCTTCCGCATTGGCAACAAGATGTGCAACATATACAAGGACACAAATATGACAATGTCGGTCTCTATAATGTTGTACACCTATCTCCAAAAAGCCCTGCATATGACCTCTTGTCAAAGATGCTTGAGTATTTCAAAATTGAACCATTACCTGGACGGAATGCACTTGTACCCTGCCAACTTGGAGAGAAAATTGTAAATTATCCTACTCGTCCAGTGGACACCACAACTGATCTTGAAGGGACAACCAATCTGCCACCTTCACAAACGGTAAATGCAGTTTCTGGCAGCATTCCCGGTGCTCATGGGTCAAATAGATCTGTGCCTCGGCCAATGAATGTTGTTGGAATGCAAAGAATGCCCCCTCAGGCAATGGCAGCTTATAATCTTTCATCTCAGGCAGCCATGGGAGATGGAATGAATCCTGGGGGTATCTCAAAGCAACGAGGTGTTCCACAGGCCCATCAGCCGCAGCAGAAGGAAAGAACAAATGGGGATGCCAGGATACCCTGCACAACAGAAGTCAAGACGAATATAAGGTTTCTGCTGGAAGAGAGACCAAGTGAAGATAGATTTGGGGTCAATACTTCAGTACCTGAACTCATGCAGGACATTCCTGGACAGGATTTGCCTTCAATACTTGCAGGCCTCACTTTATTGCAGTCAAAGATTGGGTGCATTCTTCTCTGGAATTTTGATGCTAAAATTCCAACTGTAACAATGAGGCCATGA 1536 0.4674 MGDGSGSRWSRAEWVQQYDLLGKIGEGTYGLVFLARTKTPAGTPSKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKLNHSINQYTVKSLLWQLLNGLSYLHSNWMIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDTWAVGCIFAELLTLKPLFQGAEVKATSNPFQLDQLDKIFKVLGHPTLEKWPSLASLPHWQQDVQHIQGHKYDNVGLYNVVHLSPKSPAYDLLSKMLEYFKIEPLPGRNALVPCQLGEKIVNYPTRPVDTTTDLEGTTNLPPSQTVNAVSGSIPGAHGSNRSVPRPMNVVGMQRMPPQAMAAYNLSSQAAMGDGMNPGGISKQRGVPQAHQPQQKERTNGDARIPCTTEVKTNIRFLLEERPSEDRFGVNTSVPELMQDIPGQDLPSILAGLTLLQSKIGCILLWNFDAKIPTVTMRP 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2155 511 SUPERFAMILY Protein kinase-like (PK-like) 13 312 IPR011009 -
Aed5g2155 511 PANTHER CELL DIVISION PROTEIN KINASE 8 432 - -
Aed5g2155 511 SMART serkin_6 18 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2155 511 ProSitePatterns Protein kinases ATP-binding region signature. 24 52 IPR017441 GO:0005524
Aed5g2155 511 ProSiteProfiles Protein kinase domain profile. 18 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2155 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Aed5g2155 511 Gene3D Phosphorylase Kinase; domain 1 5 101 - -
Aed5g2155 511 Gene3D Transferase(Phosphotransferase) domain 1 102 315 - -
Aed5g2155 511 PANTHER CYCLIN-DEPENDENT KINASE E-1 8 432 - -
Aed5g2155 511 MobiDBLite consensus disorder prediction 411 433 - -
Aed5g2155 511 Pfam Protein kinase domain 18 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2155 511 CDD STKc_CDK8_like 17 312 - -
Aed5g2155 511 MobiDBLite consensus disorder prediction 419 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2155 Aed-Chr5 23751202 23760848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2155 11 432 Core Cell Cycle Gene Families AT5G63610 73.815 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Aed5g2155 Pkinase 5.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2155 K02208 - gmx:100794990 847.81