Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2153 ATGCAAGTTAATGCAGTTTCTTTATTTCTAATTTTAGATTTTAGACATCACTTCACTACCAAAGAGAAGATCTTTCTTTCTTCTTCTTGTTCTACAATGAAAAGCCTCTGCCTTGGGCCGTTTCCGGCAGCTAGCAGTGCCACAGTTGGTAGAAGAGCCTTTGGAGGCAACTTAAGCAGAAAGTGCTTTCAAAAGCAACTTCACTTCCACTCACGTTGTGTCGTTTTCTCTTCATTCTCATGTTCTGCAACTCTATCAGTGGTGCCAGAATTAAAAGAGAAGCAAGTGTTTGATGGAGAGAAGGCTAATTTGCTTGTTAAAGACCTCAGAAAGAGCTTTGATTCAGGCAGGACAAAGAGCTATGAATGGAGGGTTTCCCAGTTGGAGGCCATAACTAAGATGTTAGAAGAGAAAGAGAAGGAAATTACTGAAGCTCTATACAATGACCTTGCTAAACCTCGACTTGAAGCATTTATAACCGAGATTTCCCAGGCTAAATCCTCATGTAGTGAAGCTCTTAAAGAGCTGAAAGAATGGATGAAGCCCGAGAAGGTGAATACTTCAATCACAACATTTCCATCATCAGCAGAGATTGTGCCAGAACCACTAGGGATTGTGTTGGTCATCTCAACTTGGAACTTTCCTTTCTTGTTATCAATGGATCCAGTCATTGGAGCCATTTCCGCGGGTAATGCTGTGGTCCTGAAACCATCAGAAATAGCTCCAGCAACATCATCACTGCTTGCAAATTTGATCGAACAATATCTAGACAACTCTACCATAAGAGTTGTTGAAGGGGCTATTCCTGAAACAACTGCACTTCTGGATCAGAAGTGGGATAAAATACTTTATACAGGTAGTGCTAGAGTAGGTCGCATTGTCATGGCTGCTGCTGCAAAGCATCTTACTCCAGTGATTCTGGAACTTGGAGGAAAGTGCCCAGCTGTTGTTGAATCAGATGTCAACTTACAAGTTACTGCAAGAAGAATAATAGCTGGCAAGTGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATAACAAGAAAAGAGTTTGCTCCAAAGCTGGTAAATGCCTTAAAAGAAGAATTGGAACAATTTTTTGGGAAAGATCCAATGGAGTCAAAAGACATGTCACGTATTGTATCTCCATACCAGTTTGCGCGGCTTGTGAATCTCTTGGATGAGGATAAGGTATCTGACAAAATTGTTGTAGGAGGTCAGAGGGATGAGAAGAAATTAAAAATTGCCCCAACTATCATATTGGATGTTCCTGAAGATGCTATGATAATGCAAGAGGAGATATTTGGGCCAATAATGCCAATAGTCACTGTAGACAACATAGAAGATTGCTACAGTGTAATAAAATCAAAGCCAAAACCTCTGGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGATAAGATATCTTCTGGAGGGATGCTCATCAATGACGCTGTCATCCATGTTGCAACTCGTGGTTTGCCATTTGGAGGAGTTGAAGAGAGTGGAATGGGATGTTACCATGGAAAATTCTCTTTTGATAGTTTCAGCCATAGGAAGTCAGTTCTCTATAGAAGTTTTGATGCAGATTCTAGCATAAGGTATCCCCCGTATACACCTCAGAAGGAAAAATTATTGAAGGCCCTTATCAGTGGCAATATTGTTCAAATTATTCTTGCTCTTTTGGGAAGGTCTTAA 1725 0.4058 MQVNAVSLFLILDFRHHFTTKEKIFLSSSCSTMKSLCLGPFPAASSATVGRRAFGGNLSRKCFQKQLHFHSRCVVFSSFSCSATLSVVPELKEKQVFDGEKANLLVKDLRKSFDSGRTKSYEWRVSQLEAITKMLEEKEKEITEALYNDLAKPRLEAFITEISQAKSSCSEALKELKEWMKPEKVNTSITTFPSSAEIVPEPLGIVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEIAPATSSLLANLIEQYLDNSTIRVVEGAIPETTALLDQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVESDVNLQVTARRIIAGKWACNSGQACISVDYIITRKEFAPKLVNALKEELEQFFGKDPMESKDMSRIVSPYQFARLVNLLDEDKVSDKIVVGGQRDEKKLKIAPTIILDVPEDAMIMQEEIFGPIMPIVTVDNIEDCYSVIKSKPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVIHVATRGLPFGGVEESGMGCYHGKFSFDSFSHRKSVLYRSFDADSSIRYPPYTPQKEKLLKALISGNIVQIILALLGRS 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2153 574 Pfam Aldehyde dehydrogenase family 98 531 IPR015590 GO:0016491
Aed5g2153 574 Coils Coil 128 148 - -
Aed5g2153 574 SUPERFAMILY ALDH-like 104 547 IPR016161 GO:0016491
Aed5g2153 574 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 110 529 IPR016162 GO:0016491
Aed5g2153 574 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 73 574 - -
Aed5g2153 574 PANTHER ALDEHYDE DEHYDROGENASE 73 574 IPR012394 GO:0006081
Aed5g2153 574 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 311 511 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2153 Aed-Chr5 23731474 23740276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2153 43 574 Aldehyde Dehydrogenase Gene Family AT4G34240 65.038 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2153 K00128 - gmx:100800699 993.03