Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2152 ATGCAAGGAGAATTGGAATTACCACCCGGGTTCAGATTCCACCCCACTGACGATGAGCTCGTGAATCACTACTTGTGTAGGAAGTGTGCTGCACAAACCATTTCTGTTCCCATCATCAAAGAAATTGATTTTTTGATCCATGGCACCTCCCAGCTTGATGATTGGGTGCTGTGCCGAATTTACAACAAGAAAGGGAAGATTGAGAAGTACAACAATGGTGTTGTTGGGGTGGCGAAGTTAACAGAAGAAGAGGAGGTTCATGAGACCAAACCCCAGATCAAGAAGATGTACGGTCACGATGGTTTCAGGAACGACCAATTGTACATGGACACGTCGGATTCGGTGCCGAGGTTGAACACGGATTCCAGCTCCTCCGACCACGTGGTTTCGCCTGATGGCACATGGGAGAAGGAGGTGCAGAGCGAGTCCAAGTGGAATGACCTCGACTTGGGCCCCGACCCAGTTTCGGGTTTCGATTTCAACTTCATGGAGCTGTCCTCAGATGACCCTTTTGCCCCTCAGATTCAATACCAAATGAACCAGCTTTCACCGTGGCAGGAAATGTTCGCGTACCCACCCAAGACATTTTGA 591 0.4924 MQGELELPPGFRFHPTDDELVNHYLCRKCAAQTISVPIIKEIDFLIHGTSQLDDWVLCRIYNKKGKIEKYNNGVVGVAKLTEEEEVHETKPQIKKMYGHDGFRNDQLYMDTSDSVPRLNTDSSSSDHVVSPDGTWEKEVQSESKWNDLDLGPDPVSGFDFNFMELSSDDPFAPQIQYQMNQLSPWQEMFAYPPKTF 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2152 196 PANTHER NAC TRANSCRIPTION FACTOR 56 51 170 - -
Aed5g2152 196 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 44 - -
Aed5g2152 196 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 51 170 - -
Aed5g2152 196 PANTHER NAC TRANSCRIPTION FACTOR 56 5 44 - -
Aed5g2152 196 Pfam No apical meristem (NAM) protein 8 58 IPR003441 GO:0003677|GO:0006355
Aed5g2152 196 SUPERFAMILY NAC domain 3 54 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2152 Aed-Chr5 23729123 23730762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2152 1 57 NAC Transcription Factor Family AT1G01720 61.404 7.68e-18 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed5g2152 NAM 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2152 - - gmx:100170751 231.876