Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2135 ATGATGCAGCAAGGCTGTGAGGTTGAGGCCATTGGCATAAACTATACAATCCACACACACAAATCGGAGCACCCTTTTAAAATCTTCAGCAAATCAGCACAACTTGGCACTGAGCCAGAAGATCAGGAAGCAAGAGTTGAACAAAATAGCAGTGGTGTAAGGCATGTGCTGAAGAATGTGAACTTCCAAGCCAAGCCATGGGAGATAGTAGCAATTGTTGGGCCAAGTGGAGCTGGAAAATCATCACTGCTTGAGATTCTTGCTGGTAAACATAGTCCTCAAAGTGGGACTGTGTTTCTGAATCACAAGCCTGTAGACAAAGCTGAGTTCCGGAAGCTCTCAGGGTATGTTACACAAAAGGACACTTTGTTTCCTTTACTTACAGTTGAAGAAACCCTGATGTTTAGTGCAAAGCTGAGGCTGAAACTTTCACAAGAACAACTCTGGTCAAGGGTCAAGTCACTGATTCAGGAGCTTGGACTTGACCATGTTGCTGCCACTAGAATTGGTGATGATAGGGTCCGAGGCATATCTGGTGGCGAGAGGCGCAGAGTTTCCATTGGTGTTGAAGTCATTCATGATCCAAAAGTGCTGATTCTTGATGAACCAACTTCGGGGCTTGACAGCACTTCAGCTTTGCAAATAATTGACATGCTTAAGGTCATGGCGGACACAAGAGGGAGAACCATAATCCTCAGTATCCACCAGCCAGGGTTCAGAATAGTGAAGCTCTTCAATTCATTGCTGCTGTTGGCCAATGGAAGTGTTTTGCACCATGGAACTGCTGAGTTGCTTGGTGTGAATCTAAGGCTGATGGGTTTGGAGCTTCCTCTTCATGTCAATGTAGTTGAATTTGCCATTGAGTCCATTGATACCATTCAGCAAGAGCAGAAATGTGTGCCAGTTCAGGTAGAAACTCAAACTCCAAGGCAGCAACTACTACTGCAACAACAGAAGAAAGGTGGTGATGGTGAAGCAGGTGAGGGTAGGAATGGTAAGTTCACTTTGCAACAGCTCTTTCAGCAATCCAAGGTAATTGATGAAGAAACCATGTATGCTGATGCTGGAATGGATTTCACTTATGTGTATGCTAATTCTAGATTGAGAGAAACTATGATTCTGACTCATAGGTTCTCCAAGAACATATTCCGTACAAAAGAGCTATTTGCATGCAGGACAATTCAGATGCTGGTTTCTGGGCTGGTTCTGGGGTCCATCTTTTGTAACCTTAAGGATGATCTAGGGGGAGCTTACGAAAGGGTGGGTTTATTTGCTTTTATATTAACCTTTTTGTTGTCCAGCAGCATAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAAAGAAACATCTTGTGGAAGCTATCGTGTGTCTTCCTATGCTATTGCCAATGGCCTAGTTTACTTGCCATTTCTTCTCATCCTGGCCATTTTGTTCTCAATGCCATTGTACTGGCTTGTTGGTCTCAACCGGAATGTCTTGGCGTTTTTCCACTTCTTGTTGCTGATATGGCTGATTCTCTACACGGCCAATTCAGTTGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTTATTGTTGGGAATTCAGTGATTGCTGGTGTTATAGGGTCGTTCTTCTTGTTCTCTGGATACTTCATATCAAAGCAGGAAATTCCAAACTACTGGATTTTCATGCATTATATATCCTTGTTTAAGTATCCCTTTGAAGGGTTCCTGATCAATGAGTTCTCCAACTCGGGGAAGTGCTTGGTGTACATGCTTGGGGCATGTGTGAAGAGTGGAGAGGATGTGCTTAAAGAAGAAGGGTACGGGGGAGAGAGTAATAGATGGAAGAATGTTGGTGTCACTGTGTGCTTCATCTTGGTTTACAGGTTCATTTCTTATGTTATTCTTAGATACAGATGTTCCCAGAGGGGGTTTGGCAGGGTTGGCACCAACTAA 1950 0.4359 MMQQGCEVEAIGINYTIHTHKSEHPFKIFSKSAQLGTEPEDQEARVEQNSSGVRHVLKNVNFQAKPWEIVAIVGPSGAGKSSLLEILAGKHSPQSGTVFLNHKPVDKAEFRKLSGYVTQKDTLFPLLTVEETLMFSAKLRLKLSQEQLWSRVKSLIQELGLDHVAATRIGDDRVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADTRGRTIILSIHQPGFRIVKLFNSLLLLANGSVLHHGTAELLGVNLRLMGLELPLHVNVVEFAIESIDTIQQEQKCVPVQVETQTPRQQLLLQQQKKGGDGEAGEGRNGKFTLQQLFQQSKVIDEETMYADAGMDFTYVYANSRLRETMILTHRFSKNIFRTKELFACRTIQMLVSGLVLGSIFCNLKDDLGGAYERVGLFAFILTFLLSSSIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSMPLYWLVGLNRNVLAFFHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKQEIPNYWIFMHYISLFKYPFEGFLINEFSNSGKCLVYMLGACVKSGEDVLKEEGYGGESNRWKNVGVTVCFILVYRFISYVILRYRCSQRGFGRVGTN 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2135 649 CDD ABCG_EPDR 50 260 - -
Aed5g2135 649 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 637 - -
Aed5g2135 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 263 IPR027417 -
Aed5g2135 649 Pfam ABC transporter 57 205 IPR003439 GO:0005524
Aed5g2135 649 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 278 IPR003439 GO:0005524
Aed5g2135 649 Gene3D - 40 321 IPR027417 -
Aed5g2135 649 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 637 - -
Aed5g2135 649 SMART AAA_5 66 388 IPR003593 -
Aed5g2135 649 Pfam ABC-2 type transporter 371 579 IPR013525 GO:0016020|GO:0140359
Aed5g2135 649 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2135 Aed-Chr5 23595940 23597889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2135 55 297 Calmodulin-binding Proteins AT2G36910 23.622 7.29e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2135 K05681 - gmx:100789722 1144.41