Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2122 ATGTCTCTTTACCTCGAAACCGGAATCTCTTTATCCATCATCGGCTTCTGTTCCTGCTTCACCAACCGCGCCAGGCTTCGCTGTTCCGATTCCTATGTAGTCTGCAAGATATTTCAAAAGGAAGGTCTTGGTCCCAGGAATGGTGCACACTATGGGAGACCATTTGATGAGGAAGAGTGGGATGATGAAGAAATTGGAATACCTTATGCTGCTTTGACTGCACCAGTTCCCATATTGCCTATAACATCTAATGGTTCTATTCCAAATGACATTCATCTCCCTGCTAGTGGATATATTGGGTCCGCATCCACATCATGTCTATCAGGATCAGTGCCTTCTCCTGGCACAGTAAATCCTACTGGTCCAAATGATCAAGCTGTTAATGATATTTTATCAATGGTTGATCTTCTGAAAGATGATGACAAATGGTTTGAGAAGGTTTATAATCCTGGTCTGGAAAACATTGGTGAAGGTGCACCAGCACCACCTTTAGATGAATTGTTTGAAGGCTTGGAAGACTACTGGGCTTTGCTGGCTGGTTTGTCCTCTGGCCAGAATACCGAATTTAACACAAATGGAATGGCTGCTACAGGTGATGACGAGAACTTCCTAGAGTTGAATGACCTACACACCCCATTGTTCTAG 645 0.4388 MSLYLETGISLSIIGFCSCFTNRARLRCSDSYVVCKIFQKEGLGPRNGAHYGRPFDEEEWDDEEIGIPYAALTAPVPILPITSNGSIPNDIHLPASGYIGSASTSCLSGSVPSPGTVNPTGPNDQAVNDILSMVDLLKDDDKWFEKVYNPGLENIGEGAPAPPLDELFEGLEDYWALLAGLSSGQNTEFNTNGMAATGDDENFLELNDLHTPLF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2122 214 PANTHER PLANT NAC DOMAIN PROTEIN 25 119 - -
Aed5g2122 214 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 25 119 - -
Aed5g2122 214 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 123 199 - -
Aed5g2122 214 PANTHER PLANT NAC DOMAIN PROTEIN 123 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2122 Aed-Chr5 23510976 23513714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2122 29 213 NAC Transcription Factor Family AT5G09330 31.193 2.32e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2122 - - gmx:100778933 245.743