Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2114 ATGATGATGGCTTCTTCTTCTTCTTCTTCTCTCTTCTACCTCTCTCTTTCCCTCACTCTAACCACCCTCTCATCCTCTGCACACCACAAAGGCCACCACCAAATCCCGGGCATTCCCGCCGTGACGGCCGCCGAGCCGTTAATCCAACAAGTCTGCGGCGCGACGCGCTTCCCGCAGCAATGCGTAGCCTTTCTCTCCCAATCCCAGAAGCTCCCTCAGAACCCGAACCCTCTCCAGCTTCTCCAGTCCGTCATCGCCCTCTCCTCCGTCAACCTCGCCGCCGCGCAGACAATGGTGAAGACCCTCCTCGCGGCCTCCGCCGACAGCCAAAACCGCACCGTCGCCGCCGACACCTGCCTCGAAATATTTGGCAATTCCCAGCAGCGCATTTCCCAGGCCGGCGACGCGCTCTCGAACGGCAAAACCAAGGACGCGCGCGCGTGGCTCACGGCCTCCCTCGCCTACCAGTACGACTGCTGGAACAGCCTTAAGTACGCCAACGACACGCAAATGGTCGGCAAAACGATGTCGTTTATTGACAAGCTCGAAAGTATCTCCAGCATCGCCCTCAGTTTGGTGTTTTCCTTCGACGCTTACGGAAACAACACCGCTTTGTGGAAGCCCCCCAGGACCGAGCGCGACGGCTTCTGGGAGGCAGTCGGGTCGGGTGACCCCGCGTCCCCCGGAGGGGTTCCGTCGAATTTGACTCCCGACGTCACGGTGTGTAAGAATGGAAAGGACGGCTGTTATAAGACGGTGCAGGAGGCCGTTAACGCCGCGCCAGATAATGCCGACGCTAAGAAGTTTGTCATACTCATCAAAGAAGGGGTTTACAAGGAGACCGTTAGGGTTCCGTTGGCGAAGAGGAATGTGGTGTTCTTGGGCGACGGCATCGGTAAGACAGTCATCACCGGCGACGCCAATGTTGGCCAACCAGGGATGACAACTTACAATTCTGCCACCGTCGCGGTTCTGGGCGATGGATTCATGGCAAAGGATGTGACGATCGAAAACACAGCAGGTCCCGATGCTCACCAAGCAGTGGCATTCAGATTAGACAGTGATCTTTCTGTGATTGAAAACTGTGAATTCTTAGGAAACCAAGACACTCTCTATGCTCACTCCCTGCGCCAGTTCTACAAGTCATGCCGCATTGAGGGAAACGTGGACTTCATATTTGGAAACGCTGCTGCAGTTTTCCATGACTGCAAAATCCTAGTTCGTCCCAGGCAATTGAAACCAGAGAAGGGTGAGAACAATGCCATCACAGCACACGGCAGAACAGACCCTGCACAAGCCACAGGCTTTGTTTTCCAAAACTGCTTGATTAATGGCACTGAGGAATACATGGCATTGTATCACAGCAAGCCTCAAGTGCACAAGAACTATTTGGGGAGGCCTTGGAAGGAGTTTTCTAGAACGGTTTTCATTAATTCGTTCATGGAGGTCCTTGTCACACCCCAGGGTTGGATGCCATGGAATGGTGACTTTGCTCTAAAGACACTTTACTATGGGGAGTTTGAGAACAAGGGTCCTGGCTCTGATCCGTCTCAGAGGGTTCCCTGGAGTAGCAAGATCCCTGCCGAACACGTGTCAGCGTATTCAGTGCAGAATTTCATCCAAGGAAATGATTGGATTCCTTCATCTGGTAACCCATCATCGTAA 1665 0.5375 MMMASSSSSSLFYLSLSLTLTTLSSSAHHKGHHQIPGIPAVTAAEPLIQQVCGATRFPQQCVAFLSQSQKLPQNPNPLQLLQSVIALSSVNLAAAQTMVKTLLAASADSQNRTVAADTCLEIFGNSQQRISQAGDALSNGKTKDARAWLTASLAYQYDCWNSLKYANDTQMVGKTMSFIDKLESISSIALSLVFSFDAYGNNTALWKPPRTERDGFWEAVGSGDPASPGGVPSNLTPDVTVCKNGKDGCYKTVQEAVNAAPDNADAKKFVILIKEGVYKETVRVPLAKRNVVFLGDGIGKTVITGDANVGQPGMTTYNSATVAVLGDGFMAKDVTIENTAGPDAHQAVAFRLDSDLSVIENCEFLGNQDTLYAHSLRQFYKSCRIEGNVDFIFGNAAAVFHDCKILVRPRQLKPEKGENNAITAHGRTDPAQATGFVFQNCLINGTEEYMALYHSKPQVHKNYLGRPWKEFSRTVFINSFMEVLVTPQGWMPWNGDFALKTLYYGEFENKGPGSDPSQRVPWSSKIPAEHVSAYSVQNFIQGNDWIPSSGNPSS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2114 554 Pfam Plant invertase/pectin methylesterase inhibitor 47 192 IPR006501 GO:0004857
Aed5g2114 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 192 IPR035513 -
Aed5g2114 554 Pfam Pectinesterase 238 543 IPR000070 GO:0030599|GO:0042545
Aed5g2114 554 PANTHER PECTINESTERASE 18 549 - -
Aed5g2114 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 196 IPR035513 -
Aed5g2114 554 CDD PMEI-like_3 51 193 - -
Aed5g2114 554 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 192 IPR006501 GO:0004857
Aed5g2114 554 PANTHER PECTINESTERASE 18 549 - -
Aed5g2114 554 SMART PMEI_2 43 192 IPR006501 GO:0004857
Aed5g2114 554 SUPERFAMILY Pectin lyase-like 236 552 IPR011050 -
Aed5g2114 554 Gene3D - 232 554 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2114 Aed-Chr5 23449119 23452748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2114 48 545 Carbohydrate Esterase AT5G09760 62.823 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2114 - - gmx:100819675 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2114 5 23449119 23452748 Aed5g2114 5 23449119 23452748 ECH
Aed5g2114 5 23449119 23452748 Aed10g0648 10 5210520 5213636 PCT