Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2103 ATGAACTGTCGTCTATTATTGATTTTTGATTCTGAACGTAATTTCAAATTGAATGCTGATTTGGATTATAGTGCGCTTGAGATGAGTTTGGCGGGTACAGAAAGCTCCGAAGAGGGTTCAGGGCATTTGGAGCCCCCTGACCCTGATGTCCTTGAAATTGATCCAACTTGTCGCTACATCAAGTACAAAGAAGTGATCGGCAAAGGAGCCGTCAAAACTGTTTACAAAGCATTTGATGAAGTCAATGGGATTGAAGTTGCGTGGAGCCAGGTTCAGATTGACGAGGTGTTACAGTCACCAGGTGACTTAGAGAGACTACACTCAGAAGTGCATCTCCTGAGATCACTAAAGCACAATAACATAGTCAGGTTCTACAATTCCTGGATTGATGACAAGCACAAGACAGTCAATATGATTACGGAGTTGTTCACTTCGGGCAGCCTCAAACAGTTTCGTAAAAAGCACAAGAAGGTTGACTTGAAGGCTGTTAAAGGATGGGCAAGACAGATTTTAATGGGTTTAAGCTATCTCCATAGTCACAACCCACCCATTATACACAGGGACCTGAAATGTGATAATATATTTATCAATGGTCACCAAGGAGAAGTTAAAATTGGGGATTTGGGCCTCGCCACTTTCTTGGAGCGAAGTAATGCTAAGAGCGTAATTGGAACCCCGGAGTTTATGGCACCTGAGCTGTATGATGAAAATTACAATGAATTAGCTGACATATATTCATTTGGTATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCCTACAGTGAATGCAGAAACCCAGCCCAGATATACAAGAAAGTTTCATCTGGTATAAAACCTGTTGCTCTTTCTAAAGTAGTAGATCCAGACATGAAAACATTTATTGAGAAATGTCTAGTCCCAGCATCTCAAAGATGGTCAGCCAAAGAGGTTCTGATGGACCCCTTTCTTCAAATGAATGGTTCAGCAAAGAATGGTCCTTTTCCATTGCTAGATATTGTTGTTCCCAAATTGGGATTTGAAAGCCGTTGTATGGTATCAGAAGGTCCTGCTAGTTCACGTAATGGAGACATTTCTATGGATCTTGGTGACACCAGTGACCTTCCTGTGATCACTGTATTTGATAAATCTACTGTTGATGATGCATCGTGTTCTACAAGTGTTGAGATAAAGAGGCAGAAGAGAGATGATATATTCTTTCTAAAAGGGGAAGGAAATGATGATGAGAATTCTGTATCATTAGTTCTGCGGATAGCTGATCACAGTGGACGAGCGAGAAATATCCATTTCATATTCTACCTTGAGAGTGATACTGCTGTCTTGGTATCAAGTGAAATGGTTGAGCAACTTGAACTTGCTGAGCATAATGTTAAATTCATAGCTGAGTTAATAGATTTGTTATTGATGAATTTGGTTCCTGATTGGAAACCTTGTGTAGCAATTAATCATTTGGTTTCTCCAAACAATACACAGACTCATGCGATAGCCAACAGAGAGAGTTGGAGTTGGCAAAAAGGCAAAGGAAGCTCAAAACATTCAACTGAAACTGTTGCTGATGATTTAGGTCTCTCGACCTCATCTGGCATATCGGCCGCAAAAGAAAACTTTGATAACAATAACATGGATATTGACCACGCTTTATCTCATGAGTGCACTGGTTTTCAGAAAGCAGTCAAGACAGATGATTTGTGCTCTGAGATGTCATATACTTCTGCAGCAACTGACTTCATTGATGATAAGTTTTCTATGGTTTCATTCATGTCCGCTGAATCAGGATTTGGTAGAGGGAGTCCATCCTCATTTGCATCTGAAAATTGCGCATTACCCGACTGTAAGAGCAAGTTCTCAAGCATAGAAAGCTTCTCTAGTTTTCCCAACATTGTTTCCTCTTCATCTGAACCTGTGGGTGAGTTGAAATTAAAGTTAGAAATGATTGAACAGAAGTATCAAGAAGAAATTAATGATTTATCCAGGAGAAGATACCAGACCATCTTGGAATGTTACAAGGAGAATGTCAGAAAAAATGGTACGATAGAATAG 2040 0.4005 MNCRLLLIFDSERNFKLNADLDYSALEMSLAGTESSEEGSGHLEPPDPDVLEIDPTCRYIKYKEVIGKGAVKTVYKAFDEVNGIEVAWSQVQIDEVLQSPGDLERLHSEVHLLRSLKHNNIVRFYNSWIDDKHKTVNMITELFTSGSLKQFRKKHKKVDLKAVKGWARQILMGLSYLHSHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATFLERSNAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECRNPAQIYKKVSSGIKPVALSKVVDPDMKTFIEKCLVPASQRWSAKEVLMDPFLQMNGSAKNGPFPLLDIVVPKLGFESRCMVSEGPASSRNGDISMDLGDTSDLPVITVFDKSTVDDASCSTSVEIKRQKRDDIFFLKGEGNDDENSVSLVLRIADHSGRARNIHFIFYLESDTAVLVSSEMVEQLELAEHNVKFIAELIDLLLMNLVPDWKPCVAINHLVSPNNTQTHAIANRESWSWQKGKGSSKHSTETVADDLGLSTSSGISAAKENFDNNNMDIDHALSHECTGFQKAVKTDDLCSEMSYTSAATDFIDDKFSMVSFMSAESGFGRGSPSSFASENCALPDCKSKFSSIESFSSFPNIVSSSSEPVGELKLKLEMIEQKYQEEINDLSRRRYQTILECYKENVRKNGTIE 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2103 679 SUPERFAMILY Protein kinase-like (PK-like) 62 318 IPR011009 -
Aed5g2103 679 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 31 674 - -
Aed5g2103 679 SMART serkin_6 60 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2103 679 CDD STKc_WNK 58 317 - -
Aed5g2103 679 Gene3D Phosphorylase Kinase; domain 1 46 141 - -
Aed5g2103 679 Coils Coil 635 659 - -
Aed5g2103 679 Pfam Protein kinase domain 62 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2103 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Aed5g2103 679 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 31 674 - -
Aed5g2103 679 Gene3D - 410 494 - -
Aed5g2103 679 Gene3D Transferase(Phosphotransferase) domain 1 143 324 - -
Aed5g2103 679 ProSiteProfiles Protein kinase domain profile. 60 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2103 Aed-Chr5 23379895 23382744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2103 160 510 MAP Kinase Kinase Kinase AT1G49160 63.920 1.24e-159 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aed5g2103 Pkinase 1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2103 K08867 - gmx:121175054 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2103 5 23379895 23382744 Aed5g2103 5 23379895 23382744 ECH