Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2102 ATGGAGTTCCTGGACGAGGACGCGAGGCCAAGGTTCGTGTTCCAGTCCGGTGCAGGAGCGAGCGCCGAGCCACTGCACCCGAGCCAGAAACCTACGAAGCCATTCCTCTTCGCCACCGTGTCTCTCTCATCACTCATCCTCAGCCTCTCTCTCTTCTTTGTCGAAGCGGAGCCCTTCAAATCGCTCCTCTTCTGGCTCGCGCTCTCTCTCCTCCTCGGCCCCTTCGCTCCTCCCTCCATCACTGGCGGCGACGTCCGCGTCGGGCGTGGCGAGGTGGTCAACTTCCCCGATCCGGAGTCCGAACCCGACGAGGACGCCGGTAGGAAGCCTCCTCAGCGGCGATCCAGACAGCGGAGACCGGAGGAAGTCGCCGCCGCCGTCGGTCCGGTGGTTTCCGTCGGCGCAGCGGAGAAGAAAAAAGAAGATTCTGGAATCGAGAAGCGCGCCACGGTGGTGAAGGAGGAGAAGGAATGGAGCGAGGAGGATGCGGAGGTGCTGAAGAAGCAGATGGTGAAGAATCCGGTGGGGAAGCCGGGGCGGTGGGAGGCGATAGCGGCGGCATTCGACGGAAGGCACGGAGTGGAGAGTGTGATAAAGAAGGCGAAGGAGTTGGGGGAGAAGAAAGTGGATGATTCGGAGTCGTATGCGTTGTTTTTGAAGAAGAGAAAGACGTTGGATAAGAGAGTTGTGGAGGAGAATGAGGGTGATGAGAAAGTAAGTGTTGATAATGGTTGGAGTTCTGCTGAGGATGTGGCGTTGCTGAATGCTTTGAAAGCTTTTCCTAAGGAAGTTTCAATGAGGTGGGAGAAGGTTTCTGCTGGGGTTCCCGGAAGATCTAAAGCGGCTTGTATGAAGAGATTCGCGGAATTGAAGAAAGACTTTCGGACTGCAAAAGCTTCAACCGACTGA 909 0.5688 MEFLDEDARPRFVFQSGAGASAEPLHPSQKPTKPFLFATVSLSSLILSLSLFFVEAEPFKSLLFWLALSLLLGPFAPPSITGGDVRVGRGEVVNFPDPESEPDEDAGRKPPQRRSRQRRPEEVAAAVGPVVSVGAAEKKKEDSGIEKRATVVKEEKEWSEEDAEVLKKQMVKNPVGKPGRWEAIAAAFDGRHGVESVIKKAKELGEKKVDDSESYALFLKKRKTLDKRVVEENEGDEKVSVDNGWSSAEDVALLNALKAFPKEVSMRWEKVSAGVPGRSKAACMKRFAELKKDFRTAKASTD 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2102 302 Gene3D - 151 210 - -
Aed5g2102 302 MobiDBLite consensus disorder prediction 101 121 - -
Aed5g2102 302 PANTHER TRANSCRIPTION FACTOR MAMYB 1 301 - -
Aed5g2102 302 SMART sant 241 293 IPR001005 -
Aed5g2102 302 SMART sant 154 207 IPR001005 -
Aed5g2102 302 Gene3D - 240 301 - -
Aed5g2102 302 SUPERFAMILY Homeodomain-like 240 292 IPR009057 -
Aed5g2102 302 SUPERFAMILY Homeodomain-like 156 195 IPR009057 -
Aed5g2102 302 CDD SANT 245 291 IPR001005 -
Aed5g2102 302 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 301 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Aed5g2102 302 ProSiteProfiles Myb-like domain profile. 245 291 IPR001005 -
Aed5g2102 302 MobiDBLite consensus disorder prediction 91 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2102 Aed-Chr5 23378531 23379439 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed5g2102 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2102 - - gmx:100780658 476.092