Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2070 ATGAATTTAGGGCATTGGGAGAAGTGGCTGGTGATTGCTTCAGCAGTAAAAGAAGTGGAAGAAAATTTGCCAAGAAGCTATTACCGTTGCACACAAGATAATTGTCGTGTGAAGAAACGCGTGGAACGCTTAGCTGAGGATCCAAGGATGGTTATAACAACATATGAAGGGAGACATGTTCATTCTCCGTCAATTGATCTCGAAGATTCTCAATCTCCTTCTCAACTTGGTAGCTTCTTGTGGTAG 246 0.4228 MNLGHWEKWLVIASAVKEVEENLPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSIDLEDSQSPSQLGSFLW 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2070 81 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 72 IPR044810 GO:0003700
Aed5g2070 81 Pfam WRKY DNA -binding domain 21 61 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed5g2070 81 SUPERFAMILY WRKY DNA-binding domain 21 62 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed5g2070 81 ProSiteProfiles WRKY domain profile. 24 64 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed5g2070 81 SMART WRKY_cls 17 63 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed5g2070 81 Gene3D WRKY domain 13 64 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed5g2070 81 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 19 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2070 Aed-Chr5 23166467 23167507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2070 24 81 WRKY Transcription Factor Family AT4G39410 73.016 7.93e-25 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed5g2070 WRKY 8.2e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2070 - - tcc:18611706 116.701