Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2033 ATGACCACCTCACTCGCTTGGAGACTCTCTGGCAACAATGGCACCACCCTTGCTGCAAATGATCTGGAAAGAAATGGTGATGGAAGGACTCTGGATTCAGAGCCCCCAACTCCACATTCTGTTCTGAAGATGGGATTGAGAGAGCGTAACAGCAGCATGGAGGATCCAGATGGGACATTAGCTAGTGTTGCCCAATGCATTGAGCAGCTGCGTCAGAGCTCATCTTCTGTGCAGGAGAAAGAGTATTCCTTAAGGCAGTTATTGGAGCTTATAGATATGCGTGAAAATGCTTTTAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCCAGTTCATTGAATGTGAAGATACAGGCAGCAACTGTCTTGGCCTCCCTTTGTAAAGAAAATGAGCTAAGGGTGAAGGTCTTGCTTGGAGGATGCATTCCTCCATTGCTTGGTCTACTAAAGTCCAGTTCCACTGAAGGCCAAATTGCTGCTGCAAAGACTATTTATGCTGTCTCTCAAGGTGGTGTAAAAGATCATGTTGGTTCAAAAATTTTCTCAACTGAAGGAGTTGTACCAGTGCTCTGGGAGCAGCTGAAAACTGGCCTGAAGGCAGGAAATGTAGTTGAAGGTTTATTGACTGGTGCATTGAAAAATCTCTCTAGCAATACTGAGGGATTCTGGAATGCAACAATACGAGCTGGAGGAGTGGACATATTAGTGAAGTTACTGGCAACAGGACAGCCTAGCACTTTAGCTAATGTGTGCAATTTACTTGCTTCTGTAATGATGGAGGATGCATCTGTTTGTTCAAAGGTGTTGACAGCAGAGGTAACAAAACAACTTTTGAAACTATTAGGCCCAGGTAATGATGACTCTGTTAGAGCTGAAGCAGCTGGTGCTCTGAAGTCTCTTTCTGCCCAGTGCAAAGAGGCAAGGCGAGAGATAGCCAATGCTAATGGTATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCCAAAGAATTCATGCAGGGTGAATGTGCTCAAGCATTACAGGAGAATGCTATGTGTGCTCTAGCAAACATCTCTGGGGGTTTGTCTTATGTCATATCTAGCCTTGGCCAAAGTCTTGAATCATGCACCTCACCTACCCAAATTGCTGACACATTAGGAGCTTTGGCATCCGCTCTCATGATATATGATAACAAGGCAGAATCTACCAGAGCATCAGATCCTTCAGTTGTCGAGCAGACATTACTCAACCAATTTAAACCTCGCTTGCCCTTCCTTGTACAGGAACGAACCATTGAAGCACTTGCTAGTTTGTATGGAAATTCCATACTTTCAAATAAACTCACAAATTCTGATGCAAAGCATCTGCTTGTTGGTTTGATAACAATGGCTGCCAATGAAGTGCAAGACGAGCTTGTAAAAGCTCTGTTGACACTGTGCAGAAGTGAAGGCAGTCTATGGCGTGCACTTCAGGGCCGTGAAGGAGTTCAGCTATTGATATCTCTTTTGGGGCTTTCGTCAGAACAGCAGCAAGAGTGTGCAGTTGCCCTGCTTTGCCTTCTATCATATGAAAATGATGAAAGTAAATGGGCAATTACTGCTGCTGGTGGAATACCTCCTCTTGTTCAAATTTTGGAGACAGGATCTGCAAAAGCAAAGGAAGATTCAGCATTAATCCTTAAGAACCTGTGTAATCATAGCGAAGATATACGGGCTTGCGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGCCCAAATGGGAAGGATATTGCAGCAAAGACTTTAAATCACTTAATTCATAAATCTGATACTACAACCATTAGTCAGCTTACAGCGTTATTGACTAGTGATCTTCCTGATTCTAAGGTCTATGTTTTGGATGCTTTGAGAAGTATGCTTTCTGTTGCTCCCCTTAGTGAGATTTTACGTGAAGGTAGTTCTGCCAGTGATGCGTTTGACACCATGATAATATTATTGAGCTCTACCAAAGAAGAAACTCAGGCAAAGTCTGCATCAGCTCTGGCAGGAATTTTTGAAACAAGGAAAGATGTGCGTGAAAGTAGCATTGCTGTTAAAACCCTTTTGTCAGCCATGAAATTGCTTAATGATGAATCTGAAAGTATCCTGATTCAGTCCTCACACTGCCTGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCCGCTGTTGCTAGAGACACATTATCCACCCTAGTTGCACTAGCAAACTCTTCAGTTTTGGAAGTTGCAGAGATGGCCACGTGTGCTCTGGCAAACCTTATTTTGGATAGTGAAATTGCAGAGAAAGCTATTGCAGAAGAAGTTATCTTACCTGCTACTAGAATATTATGTGAAGGCACAATTTCTGGAAAAACCCATGCTGCAGCAGCAATTGCTCGCCTCCTGCATTCTCGGGATGTTGATTATGCTGTAACTGATTGTGTGAATCGTGCTGGAACTGTTCTTGCATTAGTTTCTTTCTTAGATTCTGCTGTTAATGGATCTGTTGCCACATCAGAGGCTCTAGAAGCACTTGCCATCCTGTCCAGGTCAGAAGAGACCAGTGCAAATGTTAAAACTGCTTGTGCAGTTTTGGCTGAATTCCCTAAAAGCATAAGCCCAATAGTCTTGTGTATTGTTGATTCAGAGCCAACATTGCAGGATAAAACAATTGAGATTTTATCTCGATTATGTAAGGATCAGCCTGTTGTTTTAGGTGATACCATCGTGTCAGCACCTGGATGTATATCTTCAATAGCTAGGAGGATAATTAGTTCCACAAATGTAAAGGTCAAAATTGGGGGAGCAGCACTTCTTATTTGTACTGCTAAAGCAAATCATCAGAGACTGGCGGAGGATCTCAATTTGTCGAACTTGTGTGCCGATCTTATTCGGTCTCTTGTTGACATACTTATTTCTGCACAGCCTTCTTTGGGTTACCTGGACGGTGACAACGAGGAATTCATTAGCATATGCAGGCACACAACAGAAGAGGCCAACGGTTGTGAATCCAACACTAGCACCAACATTATATGTGGTGCTGACTTGGCAATATGGTTACTGTCTATTCTTGCTTGTCATGATGAAAAAAATAAAGTTGCAATAATGGAGGCTGGAGCAATTGATGTTCTCATTGACAGGATCTCAAATTGTTTCTCACAATATTCTCAGATGGACTACAAAGAAGATAGCAGCATGTGGATTCATGCTTTGTTGTTGGCAATATTATTTCAAAATAGAGATATCATACGGGCACATCCAACCATTAAGTCTGTACCTGCACTTACCAGCTTATTGAAGTCAGAGGAATTATCAAACAAATATTTTGCTGCACAATCGATAGCTAGCCTTGTCTGTAACGGTAGCAGGGGAACACTTTTGTCTGTGGCAAATTCTGGGGCAGCAGGTGGACTTATCTCTTTGCTTGGCTGTGCTGATACTGATATACAGGATCTTCTGGAATTGTCAGAGGAATTTTCTTTGGTGCGGTATCCTGATCAAGTGGCTCTTGAGAGATTGTTTAGAGTTGATGATATAAGAGTTGGAGCCACTTCTCGGAAGGCAATACCTGCCCTAGTTGATCTGCTCAAACCAATTCCAGATCGTCCAGGGGCACCATTTTTGGCACTTGGGCTTTTGACTCAGCTTGGTAAAGATTGTCCTTCGAATATGAATGTAATTGTGGAGTCTGGGGCCTTAGAGGCACTTACAAAGTATCTTTCATTGAGCCCACAAGATGCAACTGAAGAAGCTGCTACAGATTTGCTAGGAATTCTGTTTAGCAGTGCTGAAATACGAAAACATGAATCAGCATATGGTGCTGTTGCTCAACTTGTAGCTGTTCTACGTTTAGGAGGAAGAGGTGCAAGGTATAGTGCTGCAAAAGCCTTGGAAAGTTTGTTTTCTGCTGACCACATTAGAAATGCAGAGATTGCTCGGCAAGCTGTTCAACCATTGGTGGAGATTCTCAGTACCGGTTCAGAAAAGGAGCAGCATGCTGCCATTGCTGCATTGGTTGGGTTACTGAGTGAAAACCCATCAAGAGCACTTGCTGTTGCTGATGTTGAGATGAATGCAGTGGAAGTTCTTTGTAGGATCCTTTCATCAAATTCTTCAATGGACTTGAAAGGGGATGCTGCTGAATTATGTTGTGCTCTTTTTGGAAATACAAGGATTCGGTCCACAGCAGCTGCTGCACGCTGTGTTGAACCACTTGTCTCTCTTCTTGTAACTGAGTTCAGTCCTGCTCAGCTTTCAGTTGTCCGGGCATTGGATAGGCTTGTTGATGACGAGCAACTGGCTGAATTAGTTGCTGCACATGGTGCAGTTGTTCCTCTTGTTGGCCTACTGTCTGGTAGGAACTATTTACTTCATGAGGCTATTTCGAGAGCTCTGGTCAAGTTAGGAAAAGACAGGCCTGCTTGTAAAATTGAAATGGTGAAATCTGGAGTCATTGAAAGCGTACTTGACATCTTACATGAAGCACCTGATTATCTATGTGCAGCTTTTGCTGAATTGTTGCGTATATTGACCAATAATGCTAGCATAGCTAAAGGACCATCTGCTGCTAAAGTGGTTGAACCCTTGTTTTTGTTGTTGACAAAACAGGAATTTGGGCCTGATGGACAGCACAGTGCATTGCAGATTTTGGTTAATATCTTGGAACATCCACAGTGTCGTGCTGACCATTCATTGACTTCTCGCCAAGTTACTGAACCACTTATCCCTTTACTTGATTCTCCAATTTCAGCAGTGCAACAGTTGGCTGCTGAGCTTCTTTCACATCTACTTGTAGAAGAACGCCTTCAGAAGGATCCAGTGACACAGCAAGCAATTGGTCCTCTCATTCGAGTTCTTGGTTCTGGTATACACATATTGCAGCAGAGAGCTGTAAAAGCCTTAGTTAGTATTGCACTAACATGGCCTAATGAAATTGCTAAAGAGGGTGGTGTTATTGAAATTTCCAAAGTGATATTGCAAGCCGACCCTTCCCTTCCCCATGCTTTATGGGAGTCTGCTGCCTCGGTTTTGTCAAGTATTCTGCAGTTTAGCTCTGAATTCTACTTGGAAGTTCCTATTGCTGTATTGGTAAGGTTGCTTCGATCAGGCTCAGAGAGCACAGTTGTTGGTGCTTTAAATGCTCTTCTGGTGTTGGAAAATGATGATGGAACTAGTGCAGAAGCTATGGCTGAAAGTGGTGCTATAGAGGCTCTCTTGGAGCTCCTGCGATCTCATCAGTGTGAGGAAACAGCTGCAAGACTTTTAGAAGTATTGCTGAACAATGTAAAGATTCGAGAAACAAAAGTAACAAAATCAGCTATTGTACCATTATCCCAGTACCTTTTGGACCCACAAACTCAGGCACAGCAGGCAAGGTTATTGGCAACTTTGGCTCTTGGGGATCTGTTTCAGAATGAGGGTCTTGCTCGAACAAGTGATGCAGTTTCAGCTTGTCGTGCTTTAGTGAATGTGCTTGAAGAGCACCCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAGAATCTTGTAATGTACAGTCGATCAAATAGGAGAGCAGTTGCAGAGGCTGGTGGTGTTCAGGTTGTATTGGATCTGATAGGTTCAAGTGATCCAGAAACATCAATTCAGGCTGCAATGTTTGTTAAACTTCTCTTCTCAAATAATACTATTCAAGAGTATGCTTCTAGTGAAACAGTCAGAGCGATTACTGCCGCTATTGAAAAAGATTTATGGGCTTCTGGAACTGTAAATGACGAGTATCTGAAAGCCTTAAATTCTCTATTTAGCAACTTCCCAAGACTTAGAGCAACTGAACCAGCAACACTTAGCATTCCTCATCTAGTTACAGCCTTAAAGACAGGTTCAGAGGCTTGTCAGGAAGCTGCATTGGATGCACTTTTCCTGCTCAGACAAGCTTGGTCAGCATGCCCTGCTGAAGTTTCTAGAGCTCAGTCAATTGCAGCTGCAGATGCAATTCCATTGTTGCAGTACTTAATCCAGTCTGGGCCACCTCGGTTTCAGGAGAAAGCAGAATTTTTATTGCAGTGTTTGCCAGGGACATTGGTGGTGATCATCAAACGTGGTAACAATATGAAGCAGTCTGTTGGAAACCCAAGTGTTTACTGCAAGCTTACACTTGGCAGCACTCCACCAAGACAAACCCAGGTGGTTTCAACTGGCCCTAATCCAGAGTGGAATGAGAACTTTTCCTGGACCTTTGAGAGTCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTAAATTTGGGAAAGTTACAATCCAGATTGATCGAGTGGTAATGCTTGGATCAGTAGCTGGAGAGTACGCTTTGTTGCCTCAAAGTAAAAGTGGCCCCCCGCGGAATCTAGAAATAGAATTTCAGTGGTCTAACAAGTGA 6456 0.4308 MTTSLAWRLSGNNGTTLAANDLERNGDGRTLDSEPPTPHSVLKMGLRERNSSMEDPDGTLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSSSLNVKIQAATVLASLCKENELRVKVLLGGCIPPLLGLLKSSSTEGQIAAAKTIYAVSQGGVKDHVGSKIFSTEGVVPVLWEQLKTGLKAGNVVEGLLTGALKNLSSNTEGFWNATIRAGGVDILVKLLATGQPSTLANVCNLLASVMMEDASVCSKVLTAEVTKQLLKLLGPGNDDSVRAEAAGALKSLSAQCKEARREIANANGIPALINATIAPSKEFMQGECAQALQENAMCALANISGGLSYVISSLGQSLESCTSPTQIADTLGALASALMIYDNKAESTRASDPSVVEQTLLNQFKPRLPFLVQERTIEALASLYGNSILSNKLTNSDAKHLLVGLITMAANEVQDELVKALLTLCRSEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKEDSALILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHLIHKSDTTTISQLTALLTSDLPDSKVYVLDALRSMLSVAPLSEILREGSSASDAFDTMIILLSSTKEETQAKSASALAGIFETRKDVRESSIAVKTLLSAMKLLNDESESILIQSSHCLAAIFLSIKENRDVAAVARDTLSTLVALANSSVLEVAEMATCALANLILDSEIAEKAIAEEVILPATRILCEGTISGKTHAAAAIARLLHSRDVDYAVTDCVNRAGTVLALVSFLDSAVNGSVATSEALEALAILSRSEETSANVKTACAVLAEFPKSISPIVLCIVDSEPTLQDKTIEILSRLCKDQPVVLGDTIVSAPGCISSIARRIISSTNVKVKIGGAALLICTAKANHQRLAEDLNLSNLCADLIRSLVDILISAQPSLGYLDGDNEEFISICRHTTEEANGCESNTSTNIICGADLAIWLLSILACHDEKNKVAIMEAGAIDVLIDRISNCFSQYSQMDYKEDSSMWIHALLLAILFQNRDIIRAHPTIKSVPALTSLLKSEELSNKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVRYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLGKDCPSNMNVIVESGALEALTKYLSLSPQDATEEAATDLLGILFSSAEIRKHESAYGAVAQLVAVLRLGGRGARYSAAKALESLFSADHIRNAEIARQAVQPLVEILSTGSEKEQHAAIAALVGLLSENPSRALAVADVEMNAVEVLCRILSSNSSMDLKGDAAELCCALFGNTRIRSTAAAARCVEPLVSLLVTEFSPAQLSVVRALDRLVDDEQLAELVAAHGAVVPLVGLLSGRNYLLHEAISRALVKLGKDRPACKIEMVKSGVIESVLDILHEAPDYLCAAFAELLRILTNNASIAKGPSAAKVVEPLFLLLTKQEFGPDGQHSALQILVNILEHPQCRADHSLTSRQVTEPLIPLLDSPISAVQQLAAELLSHLLVEERLQKDPVTQQAIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVIEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRSGSESTVVGALNALLVLENDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAIVPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARTSDAVSACRALVNVLEEHPTEEMKVVAICALQNLVMYSRSNRRAVAEAGGVQVVLDLIGSSDPETSIQAAMFVKLLFSNNTIQEYASSETVRAITAAIEKDLWASGTVNDEYLKALNSLFSNFPRLRATEPATLSIPHLVTALKTGSEACQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGSTPPRQTQVVSTGPNPEWNENFSWTFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGSVAGEYALLPQSKSGPPRNLEIEFQWSNK 2151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2033 2151 Gene3D - 48 418 IPR011989 -
Aed5g2033 2151 Gene3D - 1319 1669 IPR011989 -
Aed5g2033 2151 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 536 578 IPR000225 GO:0005515
Aed5g2033 2151 Gene3D - 1815 2029 IPR011989 -
Aed5g2033 2151 ProSiteProfiles C2 domain profile. 2011 2128 IPR000008 -
Aed5g2033 2151 SUPERFAMILY ARM repeat 1101 1566 IPR016024 -
Aed5g2033 2151 Gene3D - 1177 1318 IPR011989 -
Aed5g2033 2151 Gene3D - 646 819 IPR011989 -
Aed5g2033 2151 Gene3D - 425 645 IPR011989 -
Aed5g2033 2151 Gene3D - 1680 1802 IPR011989 -
Aed5g2033 2151 Coils Coil 297 324 - -
Aed5g2033 2151 MobiDBLite consensus disorder prediction 17 39 - -
Aed5g2033 2151 Pfam C2 domain 2030 2119 IPR000008 -
Aed5g2033 2151 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2030 2133 IPR035892 -
Aed5g2033 2151 CDD C2 2032 2122 - -
Aed5g2033 2151 SUPERFAMILY ARM repeat 1581 2025 IPR016024 -
Aed5g2033 2151 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 19 2151 - -
Aed5g2033 2151 SUPERFAMILY ARM repeat 661 1062 IPR016024 -
Aed5g2033 2151 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 19 2151 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Aed5g2033 2151 SUPERFAMILY ARM repeat 55 643 IPR016024 -
Aed5g2033 2151 SMART arm_5 136 176 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 1730 1769 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 1439 1479 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 817 859 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 268 309 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 1398 1438 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 1481 1521 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 1229 1270 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 1184 1227 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 525 565 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 567 607 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 733 771 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 1857 1897 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 94 135 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 481 523 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 1312 1352 IPR000225 GO:0005515
Aed5g2033 2151 SMART arm_5 311 360 IPR000225 GO:0005515
Aed5g2033 2151 Gene3D C2 domain 2031 2150 IPR035892 -
Aed5g2033 2151 Gene3D - 820 1168 IPR011989 -
Aed5g2033 2151 SMART C2_3c 2031 2127 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2033 Aed-Chr5 22923687 22934783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2033 488 620 U-box Gene Family AT2G23140 40.000 1.54e-11 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2033 - - gmx:100794002 3905.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2033 5 22923687 22934783 Aed7g1978 7 22705057 22715268 PCT