Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2024 ATGTTCATTCTCTATTTTCATCCTGTTTACCAGATTTGCGGTGAGTCATATTTATACACCAAGAAGATAGGTAAAAGGAATAGGAAACTGTTCTGGCTGCCCGCAATATCCCCTCTTGTATCCGTTATGCTATCCACTCCTATTGTTTTTCTGACACGAGCTGACAAAAGTGGGATTAATATTGTGAGACATATAAAAGGAGGATTGAATCCAATCTCTATGAATCAGATAGATTTGAACGGCCCGCATATTGGAGCATTGGCCAAAGGAAACATAGAAGACAACACCGGAAGCATAATTCATCTTGTAATCCTTGACATCTCTAATTTGGTGAGCATTGACACCTCAGGAATTGCTTCTCTTGAGGAACTGCATAAGAGTTTGGTCTCAAGTGGGAAGCAGCTGGCTATTGCCAATCCTGGTTCGCAAGTGATTTATAAGCTAAAGTCGACCAACTTTGTGACAAGAATTGGAGGAAGGGTCTTCTTGACTATTGGAGAAGCTATTCACTGA 513 0.4074 MFILYFHPVYQICGESYLYTKKIGKRNRKLFWLPAISPLVSVMLSTPIVFLTRADKSGINIVRHIKGGLNPISMNQIDLNGPHIGALAKGNIEDNTGSIIHLVILDISNLVSIDTSGIASLEELHKSLVSSGKQLAIANPGSQVIYKLKSTNFVTRIGGRVFLTIGEAIH 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2024 170 Pfam STAS domain 96 168 IPR002645 -
Aed5g2024 170 Gene3D STAS domain 73 170 IPR036513 -
Aed5g2024 170 SUPERFAMILY SpoIIaa-like 100 169 IPR036513 -
Aed5g2024 170 PANTHER SULFATE TRANSPORTER 10 89 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed5g2024 170 PANTHER SULFATE TRANSPORTER 90 169 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed5g2024 170 CDD STAS_SulP_like_sulfate_transporter 100 163 - -
Aed5g2024 170 ProSiteProfiles STAS domain profile. 103 170 IPR002645 -
Aed5g2024 170 Pfam Sulfate permease family 19 84 IPR011547 GO:0016021
Aed5g2024 170 PANTHER SULFATE TRANSPORTER 2.1 10 89 - -
Aed5g2024 170 PANTHER SULFATE TRANSPORTER 2.1 90 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2024 Aed-Chr5 22890669 22891472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2024 18 89 Inorganic Solute Cotransporters AT5G10180 59.722 1.06e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2024 K17469 - gmx:100775538 143.28