Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2008 ATGGCTGATGGTCATGAGTCTGATGACAAGTTTGGATTTATCATCATGGATGAGAATGGTACCTTGTTTGGGACCTTGAGTGGTAATACAAGAGAGGTGCTACATAAATTCAGGGCGGATCTCCCACCAAAGAAATATGATAGAAAAAGGCTATCAGCTCTACGTGTCTCCCTTCTTCGCATGGAGAAGCATGATAACTATATGAGGATGATGGAAGAGCTTGCCACCCAGTTCTATATCAATCCTTCCAACAACCAACCCAATGTTTCTGGATTAATACTGGCGGGTTCAGGTCTTCATTTCCAATGTGAGCTTAGACGGTCATATTTGCTTGATCCTCTACTTCAGGAGAAAATACTCAATGTTGTTGATGTCTCCCGTGGAGATGAGGATGGGTTTAATCAGGCTATTGAACTATCTGCTGAAATTCGGTCAAAGCATTCAACATTGAAGGTGAATCCATATGCTAAGGATGCTCCAGCATATACACCTGACACTTGA 501 0.4232 MADGHESDDKFGFIIMDENGTLFGTLSGNTREVLHKFRADLPPKKYDRKRLSALRVSLLRMEKHDNYMRMMEELATQFYINPSNNQPNVSGLILAGSGLHFQCELRRSYLLDPLLQEKILNVVDVSRGDEDGFNQAIELSAEIRSKHSTLKVNPYAKDAPAYTPDT 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2008 166 SUPERFAMILY Translational machinery components 8 144 - -
Aed5g2008 166 Gene3D eRF1 domain 2 8 145 IPR042226 -
Aed5g2008 166 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 5 146 IPR004403 GO:0003747|GO:0006415
Aed5g2008 166 Pfam eRF1 domain 2 10 142 IPR005141 -
Aed5g2008 166 PANTHER EUKARYOTIC RELEASE FACTOR 1-3-RELATED 5 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2008 Aed-Chr5 22799151 22801323 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2008 6 145 Eukaryotic Initiation Factors Gene Family AT1G12920 73.571 2.44e-62 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2008 K03265 - ath:AT3G26618 188.348