Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1984 ATGCCAGTAGAAATGGACTTCATATTTGTGCTATTGCTATTGGGTTGCTTATGTTCTTTTGTGTTGCCTGATACGCAAGGAGATGCACTATATGCATTGAAGATATCATTGAATGCTTCAGTTCACCAGCTTACTGACTGGAATCAAAATCAAGTGAATCCTTGTACTTGGTCACGTGTTTACTGTGACTCAAACAACAATGTCATGCAAGTATCACTAGCATATATGGGATTCACAGGATACTTGAACCCAAGAATAGGAGTTCTTAAATATGTTACGGCTCTTTCTTTGCAAGGGAATGGCATCACTGGCAACATACCAAAAGAGTTAGGAAACCTGACAAGCTTGAGCAGGTTGGATTTGGAAAGCAACAAATTAACTGGAGAAATACCCTCTTCCCTTGGTAATCTTAAAAAGCTTCAATTCTTAACATTGAGTCAAAACTATCTCAGTGGGACTATTCCTGAATCACTTGCCAGTCTTCCAATCTTAATCAATGTTCTGCTAGATTCAAATAATCTGAGTGGCCAAATCCCAGAGCAGCTATTTAAGGTTTCTAAATACAACTTCACTGGAAATAATTTGAATTGTGGTGGGAATTATCATCAACCTTGCGAAACTGATAATGCAGATCAAGGTTCATCACATAAACCAAAAGCTGGCCTCATAGTTGGAATTGTGATAGGGTTAGTTGTTATCCTTTTCCTTGGTGGTCTGCTGTTCTTTTGGTGCAAGGATAGACACAAGGGCTATAGGCGTGAAGTTTTTGTAGATGTCGCAGGTGAAGTTGATCGGCGAATTGCATTTGGCCAATTAAAAAGATTTTCATGGAGGGAACTACAGATAGCTACAGACAACTTCAGTGAGAAAAATGTTTTAGGACAGGGAGGCTTTGGAAAGGTTTATAAAGGTGTTCTTGCTGATAACACAAAAGTTGCTGTCAAAAGGTTAACTGATTATGAAAGTCCTGGGGGAGATACAGCTTTCCAGCGAGAGGTTGAGATGATAAGTGTAGCTGTGCATAGGAACCTGTTACGGCTGATTGGGTTTTGTACTACCCCAACTGAGCGCCTCTTAGTTTATCCCTTTATGCAGAACTTAAGTGTAGCCTATCGTCTTAGAGAACTCAAACCTGGTGAACCTGTTCTGGACTGGCCTACAAGAAAACGAGTGGCTCTGGGAACAGCCCGTGGCTTAGAATATCTTCATGAGCATTGCAATCCTAAGATTATTCATCGGGATGTGAAGGCAGCTAATGTATTGTTAGATGAAGATTTTGAAGCTGTTGTTGGTGATTTTGGCTTGGCAAAGTTAGTCGATGTTCGAAAAACTAATGTGACAACTCAAGTTCGTGGGACAATGGGCCACATAGCTCCAGAATATTTGTCCACTGGAAAGTCTTCAGAAAGGACTGATGTTTTTGGTTATGGGATTATGCTTTTGGAGCTTGTTACAGGTCAACGGGCAATTGACTTTTCACGTTTAGAAGAGGAAGATGATGTGCTGTTACTTGACCATGTTAAGAAATTAGAACGGGAGAAAAGACTAGATGCGATTGTTGATCGCAACCTAAATAAAAATTACAACATACAAGAGGTAGAAATGATGATGCAAGTTGCATTGCTCTGTACACAAGCAACACCAGAGGACCGTCCGCTGATGTCTGAGGTTGTAAGAATGCTCGAAGGAGAAGGGTTGGCTGAAAGGTGGGAGGAATGGCAGCATGTGGAGGTCAATCGGAGGCAAGAGTATGAGAGATTACAAAGAAGATTTGATTGGGGAGAAGATTCGGTCTATAATCAAGATGCTATTGAGTTGTCTGGTGGGAGGTGA 1833 0.4103 MPVEMDFIFVLLLLGCLCSFVLPDTQGDALYALKISLNASVHQLTDWNQNQVNPCTWSRVYCDSNNNVMQVSLAYMGFTGYLNPRIGVLKYVTALSLQGNGITGNIPKELGNLTSLSRLDLESNKLTGEIPSSLGNLKKLQFLTLSQNYLSGTIPESLASLPILINVLLDSNNLSGQIPEQLFKVSKYNFTGNNLNCGGNYHQPCETDNADQGSSHKPKAGLIVGIVIGLVVILFLGGLLFFWCKDRHKGYRREVFVDVAGEVDRRIAFGQLKRFSWRELQIATDNFSEKNVLGQGGFGKVYKGVLADNTKVAVKRLTDYESPGGDTAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKPGEPVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVEMMMQVALLCTQATPEDRPLMSEVVRMLEGEGLAERWEEWQHVEVNRRQEYERLQRRFDWGEDSVYNQDAIELSGGR 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1984 610 SUPERFAMILY Protein kinase-like (PK-like) 267 562 IPR011009 -
Aed5g1984 610 Pfam Protein kinase domain 288 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1984 610 PANTHER LRR RECEPTOR-LIKE KINASE 8 610 - -
Aed5g1984 610 Gene3D Transferase(Phosphotransferase) domain 1 364 581 - -
Aed5g1984 610 CDD TM_EGFR-like 218 252 - -
Aed5g1984 610 ProSitePatterns Protein kinases ATP-binding region signature. 293 315 IPR017441 GO:0005524
Aed5g1984 610 SUPERFAMILY L domain-like 27 196 - -
Aed5g1984 610 Gene3D Phosphorylase Kinase; domain 1 256 363 - -
Aed5g1984 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Aed5g1984 610 ProSiteProfiles Protein kinase domain profile. 287 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1984 610 Pfam Leucine rich repeat 92 150 IPR001611 GO:0005515
Aed5g1984 610 Gene3D Ribonuclease Inhibitor 23 207 IPR032675 -
Aed5g1984 610 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Aed5g1984 610 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 610 - -
Aed5g1984 610 SMART serkin_6 287 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1984 Aed-Chr5 22646554 22653779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1984 4 610 Receptor kinase-like Gene Family AT5G10290 79.077 0.0 963
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aed5g1984 Pkinase 7.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1984 - - gmx:100793416 1144.41