Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1947 ATGTCGAAACCCTGGGGCAACATCGGAGCCTGGGCCGCTGATTCCGAGCGGGCCGAGGCCGAGGAGCGAGAGGCCCAGGCTGCGGCCGCCGCCGTCGAGCCCCAAAGCTTTCCCAGCCTGAAGGAGGCCGTCAACTCCAAGCCCAAGAAGAAGAAGGGAACCCCCATCCCGCTTTCCGAGTTCAACCGTGGCGGTTATGACCAGGGCCTCACGCGCGACGAGATGATGGCTCTTCCAACCGGTCCCAAGGAACGTTCTGCCGAGGAAATGCAGTTTAACCGCCTCGGCGGCGGTTTCTCCTCCTACGACCGCTCCGGTGGTCGCTCTCGCGACCGTGAAGGCGGAAACAGCGAAGGTTCGTGGGGCGGAGGAGGCAGAAGATCCTACGGCGGGTTCGACGAGGAGCGCAGGGGTCCGAGTCCTAGGGTTTCCGAACTCGATCAGCCGTCCAGGGCTGATGAGGTCGACAATTGGGCTTCGGTGAAGAAATCTGTCCCTGCCTTCGATTCCGGTCGCCAGAATCGCTTTGGTGGCGGTGGAAGCGGTTTTGGGGGCGGTGGTGGTGGTTCCGGTGGCGGTTTTGGTGGTGGCGGTGGTTTTGGTGGCGCATCTAGAGCTGATGATGTGGACAATTGGGCGGTTGGTAAGAAGCCTGTTCCTGTTAGATCTTCCAATTTCGGCTCTGGTTTTCGTGATTCTGGTGTGGAGCCTGATCGGTGGGCGAGAGGCGGTCCGCCGCGTGAGGTTGAGTCACGGATGGAGCGGCCAAGGCTGGTGCTGGATCCTCGGCGTGGCGATGGTGTGGTGAATGATGCTCCGGTGAGGGCAGCGAATAAGGGGAATCCGTTTGGCGCAGCGAGGCCTCGGGAGGAGGTGTTGGCTGAGAAGGGGTTGGATTGGAAAAAGATGGATTCGGAGATTGAGACTAAGAAGACAAGCCGGCCCACTAGTTCACACTCTAGCAGGCCTTCTAGTGCTCAATCCAATCACTCTGAGGGGACCGATGCTGTGGTGAAATTGAAGTCCAAGGTGAATCCCTTCGGGGATGCCAAGCCTAGAGAGGTTCTGCTGAATGAGCGAGGCATGGATTGGCGGAAGATTGACCTTGAATTGGAGCATCGCTCTGTTGACAGGCCCGAGACAATGGAAGAGAAATTATTGAAAGAAGAAATTGATAATTTGAAGAAGGAACTTGAGAAAGAGTCTACAATTAATTCAAACAAGGAATCTGCGGATGAGGCTGGTGGAGACCAAACCAGTACACATGCAATATTACAACAGAAAGAAAAGGAGCTGGAACTTCTTGTCCGTGATTTGGACGACAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCAGGCTCATCGGCAGGAAAGTCTTCTACTTATTCTGATAGGCCACCTTCTAGATCTGGCTCCTTTGAGGATTCTAGAAGTGTGGATTTTACAGACAGACCTCGATCTCGTGGTACAGGAGATATGTGGATGCGTCCTAGTGATGACAGAAGACAGGTTCAAGGTAGCAGGGAAAGGGGATGGTTTTCTGGCAGCAGAGACTTGAATAGGTCCACGTCAGGAGAGAGATGGTGA 1590 0.5516 MSKPWGNIGAWAADSERAEAEEREAQAAAAAVEPQSFPSLKEAVNSKPKKKKGTPIPLSEFNRGGYDQGLTRDEMMALPTGPKERSAEEMQFNRLGGGFSSYDRSGGRSRDREGGNSEGSWGGGGRRSYGGFDEERRGPSPRVSELDQPSRADEVDNWASVKKSVPAFDSGRQNRFGGGGSGFGGGGGGSGGGFGGGGGFGGASRADDVDNWAVGKKPVPVRSSNFGSGFRDSGVEPDRWARGGPPREVESRMERPRLVLDPRRGDGVVNDAPVRAANKGNPFGAARPREEVLAEKGLDWKKMDSEIETKKTSRPTSSHSSRPSSAQSNHSEGTDAVVKLKSKVNPFGDAKPREVLLNERGMDWRKIDLELEHRSVDRPETMEEKLLKEEIDNLKKELEKESTINSNKESADEAGGDQTSTHAILQQKEKELELLVRDLDDKVRFGQKAVERPGSSAGKSSTYSDRPPSRSGSFEDSRSVDFTDRPRSRGTGDMWMRPSDDRRQVQGSRERGWFSGSRDLNRSTSGERW 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1947 529 MobiDBLite consensus disorder prediction 408 423 - -
Aed5g1947 529 MobiDBLite consensus disorder prediction 1 345 - -
Aed5g1947 529 MobiDBLite consensus disorder prediction 289 315 - -
Aed5g1947 529 MobiDBLite consensus disorder prediction 398 426 - -
Aed5g1947 529 MobiDBLite consensus disorder prediction 129 158 - -
Aed5g1947 529 Coils Coil 422 442 - -
Aed5g1947 529 MobiDBLite consensus disorder prediction 235 264 - -
Aed5g1947 529 Pfam Plant specific eukaryotic initiation factor 4B 1 512 IPR010433 GO:0003743
Aed5g1947 529 MobiDBLite consensus disorder prediction 477 508 - -
Aed5g1947 529 MobiDBLite consensus disorder prediction 446 529 - -
Aed5g1947 529 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 529 - -
Aed5g1947 529 MobiDBLite consensus disorder prediction 316 335 - -
Aed5g1947 529 MobiDBLite consensus disorder prediction 454 476 - -
Aed5g1947 529 Coils Coil 384 411 - -
Aed5g1947 529 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 529 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1947 Aed-Chr5 22444828 22450276 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1947 1 529 Eukaryotic Initiation Factors Gene Family AT3G26400 56.014 2.80e-151 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1947 - - gmx:100784238 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1947 5 22444828 22450276 Aed5g1947 5 22444828 22450276 ECH