Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1946 ATGGGAGTCTTCACCTTTGTTGTTCGCAAATCCGGCAGTGAATGGAGCGCCAAGCAACATTCCGGTGACATCGAAGCCTCTGCCGACTCTACCTTCGATCTCCAACGGAAACTCGTTCAAGCTGCTCTCGCTGTCGATTCATCCGGTGGAGTTCAGTCCTCTTTCTCTCCCGTCTCTCCCTCCTCCGCTGTGTTCCAGGTGATAGTGGGTGGTGCAGTTTTCGTTGGAGGAGGTGGTGGTGCTGTTGCAGCTGCACCCTCAGGGGGTGCTGCTGCAGCTGATGCCGCCCCAGCTGCTGAGAAAAAGGAAGAGAAGGTGGAGGAAGAGTCCGATGATGATATGGGATTGGGACTGTTTGATTAG 363 0.5482 MGVFTFVVRKSGSEWSAKQHSGDIEASADSTFDLQRKLVQAALAVDSSGGVQSSFSPVSPSSAVFQVIVGGAVFVGGGGGAVAAAPSGGAAAADAAPAAEKKEEKVEEESDDDMGLGLFD 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1946 120 MobiDBLite consensus disorder prediction 106 120 - -
Aed5g1946 120 Pfam 60s Acidic ribosomal protein 73 119 - -
Aed5g1946 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 IPR044252 GO:0003735|GO:0005840
Aed5g1946 120 MobiDBLite consensus disorder prediction 86 120 - -
Aed5g1946 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1946 1 68 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 75.000 6.27e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1946 K02942 - gmx:100804776 124.02