Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1922 ATGTTGGAGAGTGGTTGCGGTGGTGAACGTGACTCTGAGGCCAGTTTGGAGACTGTCAATTCTTCCATGAGCAGCGAGAGCATTTGCAGCACCAGTTTCAGTCGTCTCTCCTTCGATCTCCTCCCTCCCTCGCCGGAGGAGAGTCTCTCCATCAAGCCTCACCGCTCCTCCGACTTTGCCTACTCCGCCATCCGCTCAGCCACGTTCCGCCGCAAGGCCGCCCTCACCTTCCGCGACTTCCACCTCCTCCGCCGCATCGGCGCCGGTGACATCGGCACCGTCTACCTCTGCCGCCTCCGCCACGCCAACAACAAAAAAAACAACCACGATGAAGACGAAGAAGAAGATGATGTTTCGTGTTTATACGCCATGAAGGTGGTGGACAAAGACGCAGTTGCATTGAAGAAGAAGTCTCAGAGAGCGGAAATGGAGAGAAAAATCCTCAAGATGCTCGACCACCCGTTCCTCCCTACGCTCTACGCCGAGTTCGAAGCCTCCCACTTCTCTTGCATCGTCATGGAGTTTTGTTCCGGTGGAGACTTGCACTCCCTGCGCTTCAAGCACCCTCACAACCGTTTCCCTCTCTCCTCCGCAAGATTTTATGCCACGGAGGTGCTGGTGGCGTTGGAATACCTCCACATGCTGGGAATCATCTACAGAGATTTAAAGCCTGAGAACGTGTTGGTTAGATCTGACGGTCACATCATGCTTTCTGATTTTGATCTTTCTCTTTGCTCAGATGCAATCCCAGCCGTTGAATCTTCGGTTACCTTACACGATCAATCTCCATCTCCATTACCTTACGCTTACACCCGCTCGCATTCATTTTCTTTTATCAGTCCATTCTCCTGCTTCTCGAACCGGGTTTCCCGCTCGCGCGAGGTTCGAGCCATTGAACCGAACCGGCTCTTTGTTGCTGAACCGGTTTCGGCTCGGTCCTGTTCCTTTGTTGGGACCCACGAATACGTCTCGCCGGAGGTTGCTTCCGGCCGGTCGCACGGGAACGCCGTGGACTGGTGGTCGTTTGGAGTATTTATCTACGAGCTCATCTACGGTCGCACACCGTATGCGGGTCCATCGAAGGAGGCTACGCTGCGGAACATCGTAAAGAAACCCCTGGCGTTCCCCACGGCCACGCCCGCGAGTAGTCTTGAAGGCCACGCGCGGGATTTGATATCCGGCTTGCTGAACAAGGACCCGGCGCGACGGCTCGGCTCGAAGCGCGGCGCCGCTGACGTCAAGAAGCACCCCTTCTTCAAAGGGATGAACCTGGCGCTGATTCGCATGCAGACGCCGCCCGAAGTGCCTGGCTCGAGAAGGGCCAAAACGACGTCCCTGTACCCTGTGAAGGCTAACAGCAACGACCATAAACAACAGCAGACGGCGTCGTTTGATTTTTACTTCTAA 1407 0.5537 MLESGCGGERDSEASLETVNSSMSSESICSTSFSRLSFDLLPPSPEESLSIKPHRSSDFAYSAIRSATFRRKAALTFRDFHLLRRIGAGDIGTVYLCRLRHANNKKNNHDEDEEEDDVSCLYAMKVVDKDAVALKKKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRFKHPHNRFPLSSARFYATEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSVTLHDQSPSPLPYAYTRSHSFSFISPFSCFSNRVSRSREVRAIEPNRLFVAEPVSARSCSFVGTHEYVSPEVASGRSHGNAVDWWSFGVFIYELIYGRTPYAGPSKEATLRNIVKKPLAFPTATPASSLEGHARDLISGLLNKDPARRLGSKRGAADVKKHPFFKGMNLALIRMQTPPEVPGSRRAKTTSLYPVKANSNDHKQQQTASFDFYF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1922 468 PANTHER FLIPPASE KINASE 1-RELATED 8 468 - -
Aed5g1922 468 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 8 468 - -
Aed5g1922 468 Pfam Protein kinase domain 80 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1922 468 Pfam Protein kinase domain 313 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1922 468 ProSiteProfiles Protein kinase domain profile. 80 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1922 468 Gene3D Transferase(Phosphotransferase) domain 1 176 243 - -
Aed5g1922 468 Gene3D Phosphorylase Kinase; domain 1 78 175 - -
Aed5g1922 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Aed5g1922 468 SMART serkin_6 80 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1922 468 SUPERFAMILY Protein kinase-like (PK-like) 60 439 IPR011009 -
Aed5g1922 468 Gene3D Transferase(Phosphotransferase) domain 1 312 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1922 Aed-Chr5 22335852 22337360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1922 9 467 AGC Kinase Gene Family AT2G34650 64.655 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed5g1922 Pkinase 2.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1922 - - vun:114177159 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1922 5 22335852 22337360 Aed5g1922 5 22335852 22337360 ECH