Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1906 ATGGATATTCTCATGCAATCTTTGTCACTTACTTTGATCACCTTGATTGCATCTATCTTTGTTTTGCAGAAAAGGAGAAGAATAAGAGTACTACTAGGTGGCACTAAAAACTTGCCCCCTGGTAGCTTTGGGTGGCCCCTAGTGGGTGAATCCTACCAATTTTTGTTCAACAAGATTGAACATTTCCTTCAAGAGAGGCTCAAAAAGCACTCCTCAGAGATCTTCCACACGCACATACTAGGAGAGCCAACAGTGGTTCTTTGTGGCCCTTCTGCAAACAAATTTGTCTCCACCAATGAGACAAAGCTTGTCAAAGTTTGGTACATGAAGACTCAGCGCAGGTTCTTCAATATTCCTGATCAGACACATGCACCTATGCCAAAACCAAAACAAGAAGCAGCTGCTGCTCCTGTTAAGATCTTGGGGATTCTGAAACCTGAGGGAATAGTTAGGTACATGGGGAACAAGATTGAATCAACCATGCACCAACATTTCATGACACACTGGGAAGGAAAAACTGAAGTGAAGGTGTACCCTTTGGTGAAGGCGTTGACCCTCACACTGGCGTGTCAATTCTACTTAGGCATTGATGAACCAACAAAATTTGCCACTGAGTTTGAGAACTTGTATTTTGGGATCTATTCTGTTCCTGTGAATTTTCCAGGCTCTACATACCAAAGGGCACTCAAGGCTGCAGCTGCTATAAGGAAAGAGATTCAATTTCTGATCAAAGAAAAGATTGATGCTTTGTCCAAGGGGCAAGTTGTGGATGGCCTAATAGCACACGTTGTTGGTGCTGAGAAGGGTGGAAAATATGTGCCAAGACTTGAAATAAGCAACATCATCATGGGCTATATATCTTGCTTCCTTTTATTTGAATCAGAACATGCTGATATTACAAAATCCAAAGGACCCGATGCAGCACTAGATTGGGACAGCATACAGAAATTGAAGTACACATGGGCTGTTGCACAAGAGACCATGAGATTCTACCCAACTGCACCGGGTGCATTCAGAGAGGCAATAACAGATATCACCTATGAAGGTTTTACTATTCCAAAGGGGTGGAAGATATTTTGGGCATTTATTGGAACAAATAAGAGTCCAAAGTACTTTAATGAACCTGAAAGTTTTGATCCATCAAGGTTTGAAGGGAATAATATTGCTGCTCCGTACACTTGGATACCCTTTGGAGCTGGACCAAGATCTTGCCCCGGAAAAGACTACACACGGTTTGTGGTTCTTAATTTCATTCACATTCTCATAACAAAGTTCAAGTGGGAAGCTATACTTCCTGATGAGAAGGTTTTAGGTTCTTCGGTACCTATCCCAGCAGAGGGAATTCCTATCCGTCTTTATCAATACTAA 1368 0.4203 MDILMQSLSLTLITLIASIFVLQKRRRIRVLLGGTKNLPPGSFGWPLVGESYQFLFNKIEHFLQERLKKHSSEIFHTHILGEPTVVLCGPSANKFVSTNETKLVKVWYMKTQRRFFNIPDQTHAPMPKPKQEAAAAPVKILGILKPEGIVRYMGNKIESTMHQHFMTHWEGKTEVKVYPLVKALTLTLACQFYLGIDEPTKFATEFENLYFGIYSVPVNFPGSTYQRALKAAAAIRKEIQFLIKEKIDALSKGQVVDGLIAHVVGAEKGGKYVPRLEISNIIMGYISCFLLFESEHADITKSKGPDAALDWDSIQKLKYTWAVAQETMRFYPTAPGAFREAITDITYEGFTIPKGWKIFWAFIGTNKSPKYFNEPESFDPSRFEGNNIAAPYTWIPFGAGPRSCPGKDYTRFVVLNFIHILITKFKWEAILPDEKVLGSSVPIPAEGIPIRLYQY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1906 455 Gene3D Cytochrome P450 33 287 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1906 455 Gene3D Cytochrome P450 293 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1906 455 PANTHER CYTOCHROME P450 26 13 453 - -
Aed5g1906 455 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 13 453 - -
Aed5g1906 455 Pfam Cytochrome P450 306 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1906 455 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Aed5g1906 455 Coils Coil 225 245 - -
Aed5g1906 455 PRINTS E-class P450 group I signature 361 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1906 455 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1906 455 PRINTS E-class P450 group I signature 321 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1906 455 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1906 455 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1906 455 SUPERFAMILY Cytochrome P450 36 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1906 Aed-Chr5 22221648 22223577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1906 37 358 Cytochrome P450 AT5G36110 31.445 3.20e-59 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1906 K20667 - gmx:100782971 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1906 5 22221648 22223577 Aed5g1906 5 22221648 22223577 ECH