Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1899 ATGGCTCTGGGAAGAGGCAGTGCAGTGATGCTACTAGTTTGCTTCTTGGTGCTTCAGTCTGTCTCAGAGAGGGCTCATGCCGCCACCTACAACGTTGGAGATGCTGGGGGTTGGACCTTCAACACTATTAGCTGGCCCAAGGGAAAGCGCTTTAGGGCCGGTGACACACTTGTGTTCAAATATAGCCCTGGGGCTCACAATGTTGTGGTGGTGAACAAGGCTGGGTACGATACCTGCAAGACTCCGAGGGGAGCGAAGGTGTATCGGTCAGGGAAGGATCAGATAAAACTCGCTAAGGGACAGAACTACTTCATCTGCAATTACGTCGGTCACTGCGAGTCTGCCATGAAAATTGCCGTCAACGCTGCCTGA 372 0.5269 MALGRGSAVMLLVCFLVLQSVSERAHAATYNVGDAGGWTFNTISWPKGKRFRAGDTLVFKYSPGAHNVVVVNKAGYDTCKTPRGAKVYRSGKDQIKLAKGQNYFICNYVGHCESAMKIAVNAA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1899 123 Pfam Plastocyanin-like domain 38 115 IPR003245 GO:0009055
Aed5g1899 123 ProSiteProfiles Phytocyanin domain profile. 28 123 IPR003245 GO:0009055
Aed5g1899 123 CDD Plantacyanin 28 122 IPR041844 -
Aed5g1899 123 PANTHER BASIC BLUE-LIKE PROTEIN 4 121 - -
Aed5g1899 123 Gene3D - 28 122 IPR008972 -
Aed5g1899 123 SUPERFAMILY Cupredoxins 28 122 IPR008972 -
Aed5g1899 123 PANTHER BLUE COPPER PROTEIN 4 121 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1899 Aed-Chr5 22173639 22174591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1899 9 122 Phytocyanin Superfamily AT1G17800 40.171 4.43e-24 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1899 - - gmx:100305948 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1899 5 22173639 22174591 Aed5g1899 5 22173639 22174591 ECH