Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1885 ATGGACAAGTACGAGGAAGTGAATGAGAACATAGGGTCTGGGAGATTTGCGGTCGTAAGGCTTATGCGTCACAAAGAGACCAAAGATCTCGTTGCCGTCAAATTCATCTCACGAGGAATAGGGATTACCGAGAGAGTGGCAATGGAAATCATTAACCTTAGATCTCTTCGTCATCGGAATGTTGTTCAGTTGAAGGAGGTGGCTTTGACTCCAACACATCTTGCAATAGTAATGGAGTATGCAGCGGGTGGAGATTTGTTTCAACGAGTTTGCAAAGGAAGACTGGAAGAAGACGAGGACATATGCCATCGAGACTTAAAGTTGGAGAATATCTTATTGGATGGAAGCCCTGCTAATAGTCTTAAAATTTGTGATTTCGGCTATTCTAAGTCATACATACATCATTCGAGGCCTCATTCAATGGTTGGAACTCCAGCCTATATTGCACCAGAGGTTCTTACTGGGAAAGTTTATGATGGAAAGATAGCAGATGTATGGTCCTGTGGAGTTATACTTTATGCAATGCTGGTAAGAGCATTGCCCTTTGAGGATAAAGAGGACACTCAAAATCTCCGGAAAACTGTAACACTGGTTATGAATGTTCTATTCAACTTCCCCGACAACATTTCCTTATCTACAGACGTTAAAAATCTTATATATCGGATTTTTGTGGCAGATCCAGCAAAGAGAATCACCATGAGGGAAATCAAGTCACATCCATGGTTTATAAAGAACCTGCCTAAGGAATTGAGAGAAGGGGCTCCTTACAACACTGAAGAAAATACAAAATATCCTCTTCAAAGTATAGAAGAGATCATGAACATTGTCAACGAGGCCAAAACTACACCTGCAGCTGAAATCATACATGAGAAGGAATGA 879 0.4107 MDKYEEVNENIGSGRFAVVRLMRHKETKDLVAVKFISRGIGITERVAMEIINLRSLRHRNVVQLKEVALTPTHLAIVMEYAAGGDLFQRVCKGRLEEDEDICHRDLKLENILLDGSPANSLKICDFGYSKSYIHHSRPHSMVGTPAYIAPEVLTGKVYDGKIADVWSCGVILYAMLVRALPFEDKEDTQNLRKTVTLVMNVLFNFPDNISLSTDVKNLIYRIFVADPAKRITMREIKSHPWFIKNLPKELREGAPYNTEENTKYPLQSIEEIMNIVNEAKTTPAAEIIHEKE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1885 292 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Aed5g1885 292 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Aed5g1885 292 PANTHER SERINE/THREONINE KINASE 2 285 - -
Aed5g1885 292 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 285 - -
Aed5g1885 292 SUPERFAMILY Protein kinase-like (PK-like) 7 263 IPR011009 -
Aed5g1885 292 Gene3D Transferase(Phosphotransferase) domain 1 97 292 - -
Aed5g1885 292 Pfam Protein kinase domain 7 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1885 292 Pfam Protein kinase domain 99 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1885 292 SMART serkin_6 5 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1885 292 ProSiteProfiles Protein kinase domain profile. 5 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1885 292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 101 113 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1885 Aed-Chr5 22078576 22080732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1885 6 246 CBL-interacting serine-threonine protein kinases AT5G25110 38.722 8.69e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aed5g1885 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1885 K14498 - gmx:100787825 421.779