Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1882 ATGGAGTTGGCTTTGAAAATTGCTGGTAAGATCAGTGCAAACGAACGTTTTTGTGTATATATACTTCTACCGATGTGGCCAGAGGGTGTTCCAACAAGTGCTGCTGTTCAAGAAATTTTGTTCTGGCAGGGACAGACAATGTCAATGATGTACAAGATTATAGGAGATGCCCTTAGAAAAGTAGGTCTCTCGGATCTGTATCATCCACAAGATTATCTCAATTTTTACTGCCTTGGAAACAGAGAACCACAATCCTCAAATGTATCACAAACACCAAATCCATCTTCTGAAAACCGCGCTTTGGTGTATGGATACAGAATGTCACTGTGGGCAGAGCACCTTGGTACTCTTGATCATTGTTTTGCTGAACCTCACTACCTGGATTGTGTTAGACATGTCAACAAAATTGCCAAACAAAACTGGGACATTTATGTGTCTGAGGAAAATAAGCGAATGAGGGGACACTTGATGCAATATCCAGTTAAGATCAGCAGGGATGGAAAAGTCAGTGCACTTGATGATTATGAATCCTTTCCTGATGTTGGTGGCAAAATTCTTGGATCACCAAATTCACTTCCGGATGCACTAACCACCTGA 597 0.4137 MELALKIAGKISANERFCVYILLPMWPEGVPTSAAVQEILFWQGQTMSMMYKIIGDALRKVGLSDLYHPQDYLNFYCLGNREPQSSNVSQTPNPSSENRALVYGYRMSLWAEHLGTLDHCFAEPHYLDCVRHVNKIAKQNWDIYVSEENKRMRGHLMQYPVKISRDGKVSALDDYESFPDVGGKILGSPNSLPDALTT 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1882 198 Pfam Phospholipase D C terminal 118 188 IPR024632 -
Aed5g1882 198 PANTHER PHOSPHOLIPASE D 1 92 IPR015679 -
Aed5g1882 198 PANTHER PHOSPHOLIPASE D 97 198 IPR015679 -
Aed5g1882 198 PANTHER PHOSPHOLIPASE D 1 92 - -
Aed5g1882 198 PANTHER PHOSPHOLIPASE D 97 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1882 Aed-Chr5 22060386 22064310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1882 1 198 Phospholipase D Gene Family (Wang group) AT1G55180 36.122 7.90e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1882 K01115 - mus:103998536 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1882 5 22060386 22064310 Aed5g1882 5 22060386 22064310 ECH