Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1881 ATGGGTAAGGGCCCCTTCTCCTCCTTCCGCCGCTCCGCCTCTCGCCGCCGCCCCAAGAAGACCTCCGCACCGCCCCCGCCTCCGTCTCCGCCGAAGCCTCCATACGCTGCCGGAATCACCGCCTCGCCGGAAGACAACAACCGGCTGATCGCCGCCGGCGGCAGCAGCGCGGTTACGAAGGCGAAGAAGAAAACCGGGACTACCCGGTTGTGGATGAGGTTCGACCGGTCGGGCCGGTCAGAACTCGTGGAGTGGGAGAAGAACGCCATCATCCGCCACGCCGCGATTCCCGCCAGAGACTTGCGAATTTTGGGCCCCGTCTTCTCCCACTCCTCCAACATCCTCGCTAGAGAGAAAGCAATGGTGGTTAATTTGGAGTTTATAAAGGCAATTGTGACTGCTGAAGAAGTGTTATTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCCTTTGTTGAGCAACTCAGGCAACAGCTTCCTTCAAAAACTCAACCTAAACCCACTGAGGAACAGGAAGGTGAAATGCAGGCTTCCGATGGTTTGCAGTCTGAGCTTCCGTTTGAGTTTCAGGTTCTGGAGATTGCTTTGGAGGCTGTGTGTACTTATCTCGACTTGAATGTTGCAGACCTCGAGCGTGGTGCTTACCCTGTGTTGGATGAATTGGCTAGAAATGTTAGCACCAAGAATCTTGAGCATGTCAGGAGTTTGAAGAGTAATCTTACGCGGTTGCTTGCGCGAGTGCAGAAGGTGCGAGATGAAATTGAACATCTGTTAGATGACAATGAAGATATGGCACAACTATATTTGACACGGAAGTGGTTGCTGAATCAACAATTTGAGGAGGCTCATTTGGGTGCCACAACCTCAAATAACTTTCCTAATCCCCCACGTTCTGTTCGTAGATTTGGTTCTTACAGAAGTGAAACCAGCCATTATGAGGATGATGATGATGTAGAGGACTTGGAGATGTTGCTTGATGCATATTTCATGCAGTTGGATGGAACTCGTAACAAGATATTATCTGTTAGAGAGTATATTGACGACACTGAAGACTATGTTAACATCCAACTTGATAACCACCGAAATGAACTTATTCAGCTGCAGTTGACGTTGACTATTGCAACATTTGCTATTGCTATTGAAACTTTGATTGCTGGTGCATTTGGTATGAACATTCCTTGTAAATTATATCTCATTGATGGGATATTTTGGCCCTTCGTCTGGATCACGTCTGGAGCTTGCGTATTGCTTTTCTTTCTTATTTTAGCATATGCAAGATGGAAGAAGTTGCTGGGATCATAA 1299 0.4827 MGKGPFSSFRRSASRRRPKKTSAPPPPPSPPKPPYAAGITASPEDNNRLIAAGGSSAVTKAKKKTGTTRLWMRFDRSGRSELVEWEKNAIIRHAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPSKTQPKPTEEQEGEMQASDGLQSELPFEFQVLEIALEAVCTYLDLNVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLLNQQFEEAHLGATTSNNFPNPPRSVRRFGSYRSETSHYEDDDDVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIATFAIAIETLIAGAFGMNIPCKLYLIDGIFWPFVWITSGACVLLFFLILAYARWKKLLGS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1881 432 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 368 419 IPR045863 -
Aed5g1881 432 Gene3D Magnesium transport protein CorA, transmembrane region 144 363 - -
Aed5g1881 432 Coils Coil 232 266 - -
Aed5g1881 432 MobiDBLite consensus disorder prediction 158 179 - -
Aed5g1881 432 MobiDBLite consensus disorder prediction 1 42 - -
Aed5g1881 432 CDD Mrs2_Mfm1p-like 71 429 IPR039204 -
Aed5g1881 432 MobiDBLite consensus disorder prediction 20 37 - -
Aed5g1881 432 Gene3D - 56 142 - -
Aed5g1881 432 Pfam CorA-like Mg2+ transporter protein 311 425 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed5g1881 432 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 7 432 - -
Aed5g1881 432 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 7 432 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1881 Aed-Chr5 22051267 22054403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1881 1 432 MRS2 Gene Family AT3G58970 65.393 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1881 K16075 - gmx:100812561 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1881 5 22051267 22054403 Aed7g1897 7 22086863 22094824 PCT