Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1868 ATGGAGTTGATCAACCTTGTAGTCTTGCCAGCAGTTTTTGCATTCTTTGTCCTTTCTCTACATTTCATCACTATACTTCTCAGGCTCAGGAAGCATCCAAACCTTAATCTTCCTCCCGGAAGATTAGGATGGCCTATTGTTGGAGAAACCTTTGAGTTTATGCGTACAATGCAAGAGGGCAACATGTTAAGTTTCATACAAGAGAGAGTGGAGAAATATGACTCCAGGGTCTTCAAGACTTCATTGTTTGGAGATCCTGTTCTTGTGTTTTGCGGGCCAGCTGGGAACAAGTTCCTATTCAGCAATGAGAACAAGAATGTTCAAGTTTGGTGGCCTAGTTCGGTGAGGAAGTTGTTAAGGTTGTCTTTGGTTAATAAGGTTGGTGATGAGGCAAAGATGGTGAGAAGGTTGCTCATGAGTTTTCTTAATGCTGAAACACTCAGAAACTACTTGCCTAAAATGGATACCATTGCTCAGCGCCATTTAGACTCATATTGGGAAGGAAAGGAGCAGGTGTTTGTCTATCCCATAGTACAGCTATACACGTTTGAATTGGCTTGTTGCTTATTTTTAAGCATTGAAGACTCTGACCATATATCAAAGCTTTCCTTAAAATTTGATGAGTTTCTGAAAGGGATCATTGGCTTCCCCCTCAACATTCCTGGAACAAGGTTTCATCGTGCAATGAAAGCTGCAGATTTAATCAGGAAAGAAATTAAAATGATTTTGAAGAAAAGGAAAGTGGATTTGGAGGAGAAGAGGGCACCACCTACTCAAGACCTTCTATCACACATGCTTGTTACATCTGACACCAATGGAAGGTTTATGACTGAAATGGAGATTATTGATAACATACTTCTTCTACTTTTCGCAGGCCATGATACTTCTAGATCAGTGTTATCATTGGTCATGAAGTATCTTGGAGAGTTGCCTCAAGTTTATGAACTTGTCTTGAAAGAACAACTTGAAATTAGTCAAGGGAAAGAGGCAGGGCAATTGTTGCAATGGGAAGATGTTCAGAAAATGAAATACTCTTGGAATGTTGCATCTGAAGTCATAAGGCTGTCCCCACCTGTTGGTGGTGCTTATAGAGAAGCTATAAAGGATTTCACCTATGCTGATTATAACATCCCTAAAGGGTGGAAGCTGCATTGGAACACTGGTTCATCACACAAGGATCCAGCACTCTTCTCGAATCCGGAAACTTTTGATGCTTCAAGGTTTGAAGGAGCAGGGCCTACACCTTTTTCATATGTTCCATTTGGAGGTGGCCCTCGAATGTGTTTGGGGCAAGAGTTTGCAAGACTAGAGATACTTGTGTTCATGCATAATATTGTGAAAAGGTTCAAGTGGGATTTGATGATTCCTGATGAGAAGTTCAAGTATGATCCCATGCTAGAACCAGTAGAAGGACTTGCAATTCGACTTCATCCTTCTCATTTCTAG 1446 0.4087 MELINLVVLPAVFAFFVLSLHFITILLRLRKHPNLNLPPGRLGWPIVGETFEFMRTMQEGNMLSFIQERVEKYDSRVFKTSLFGDPVLVFCGPAGNKFLFSNENKNVQVWWPSSVRKLLRLSLVNKVGDEAKMVRRLLMSFLNAETLRNYLPKMDTIAQRHLDSYWEGKEQVFVYPIVQLYTFELACCLFLSIEDSDHISKLSLKFDEFLKGIIGFPLNIPGTRFHRAMKAADLIRKEIKMILKKRKVDLEEKRAPPTQDLLSHMLVTSDTNGRFMTEMEIIDNILLLLFAGHDTSRSVLSLVMKYLGELPQVYELVLKEQLEISQGKEAGQLLQWEDVQKMKYSWNVASEVIRLSPPVGGAYREAIKDFTYADYNIPKGWKLHWNTGSSHKDPALFSNPETFDASRFEGAGPTPFSYVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWDLMIPDEKFKYDPMLEPVEGLAIRLHPSHF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1868 481 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1868 481 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1868 481 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1868 481 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1868 481 Pfam Cytochrome P450 38 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1868 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Aed5g1868 481 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1868 481 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1868 481 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1868 481 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1868 481 SUPERFAMILY Cytochrome P450 31 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1868 481 Gene3D Cytochrome P450 28 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1868 481 PANTHER CYTOCHROME P450 26 23 469 - -
Aed5g1868 481 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 23 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1868 Aed-Chr5 21932497 21934869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1868 36 383 Cytochrome P450 AT5G36110 45.014 3.82e-104 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1868 - - gmx:100778750 900.968