Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1865 ATGGGTAATTGCTGGTGTAGGTTGGAGTCATCAGAGTATAGAGTCTCCTCCAATGTAAAATCAGAACAAAACCAGGGGGGAAGCAGACAATGGAATGATGATAGTAAGTTACCATCGAATCCTGAAGAAGTAGAAGACCTAAGGCGTGACTCAGCTGCAAATCCATTGATTGCATTCACTTATGATGAGTTAAAGATAATCACTGCAAATTTTAGGCCAGATCGTGTGTTGGGGGGAGGAGGATTTGGAAGTGTTTACAAAGGTTTCATTTCTGAGGAGTTAAGACAAGGGATTCCTACTCTTGCCGTAGCTGTTAAGGTTCATGATGGTGACAACAGTCATCAAGGCCACAGAGAATGGCTGGCAGAAGTCATATTTTTGGGGCAGCTTTCACATCCAAATCTAGTCAAATTAATTGGATATTGCTGTGAAGACGAACATAGGGTGCTAATATATGAGTACATGTCCCGGGGGAGTGTGGAACACAACTTGTTCTCAAAAATTTTGCTTCCGATGCCATGGTCCATAAGAATGAAGATTGCATTTGGCGCTGCCAAGGGACTTGCATTTCTTCATGAAGCAGAGAAACCTGTCATCTATCGAGATTTTAAAACATCAAATATTTTATTGGACCAGGACTACAATGCAAAACTTTCAGACTTTGGCCTCGCTAAGGATGGACCAGTTGGAGACAAATCCCATGTTTCAACTCGAGTCATGGGAACTTATGGTTATGCAGCACCTGAATACATAATGACAGGTCATCTGACTCCTAGAAGCGATGTATACAGTTTTGGTGTTGTTCTTCTTGAACTCCTAACTGGAAGAAAATCATTAGACAAGTTAAGACCTGCTAAAGAGCAGAACCTTGCAGAATGGGCACTTCCAATGCTGAAGGAAAAGAAGAAGTATCTAAACATCATAGATCCAAGGATGGATGGTGATTATCCAATTAAAGCAGTTCACAAGGCTGCAATGCTTGCATACCATTGCTTGAATCGCAACCCGAAAGCAAGGCCTCTAATGCGAGACATTGTAGACTCATTGGAGCCTTTGCTGCAGCCACACACTGAGGTGGTGGTCCCTGTTGGAAAAACATTGACCATAATCACTGAGGTTGTTCCTGAATCTGGTTTGAAAATCAAAGATGATGATGCAAAAAAATGA 1167 0.419 MGNCWCRLESSEYRVSSNVKSEQNQGGSRQWNDDSKLPSNPEEVEDLRRDSAANPLIAFTYDELKIITANFRPDRVLGGGGFGSVYKGFISEELRQGIPTLAVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEYMSRGSVEHNLFSKILLPMPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDQDYNAKLSDFGLAKDGPVGDKSHVSTRVMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLTGRKSLDKLRPAKEQNLAEWALPMLKEKKKYLNIIDPRMDGDYPIKAVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLLQPHTEVVVPVGKTLTIITEVVPESGLKIKDDDAKK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1865 388 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 10 359 - -
Aed5g1865 388 Gene3D Phosphorylase Kinase; domain 1 34 154 - -
Aed5g1865 388 ProSiteProfiles Protein kinase domain profile. 71 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1865 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Aed5g1865 388 ProSitePatterns Protein kinases ATP-binding region signature. 77 106 IPR017441 GO:0005524
Aed5g1865 388 SUPERFAMILY Protein kinase-like (PK-like) 47 349 IPR011009 -
Aed5g1865 388 Gene3D Transferase(Phosphotransferase) domain 1 155 363 - -
Aed5g1865 388 MobiDBLite consensus disorder prediction 17 47 - -
Aed5g1865 388 CDD STKc_IRAK 77 352 - -
Aed5g1865 388 PANTHER OS01G0588500 PROTEIN-RELATED 10 359 - -
Aed5g1865 388 MobiDBLite consensus disorder prediction 17 35 - -
Aed5g1865 388 Pfam Protein tyrosine and serine/threonine kinase 74 349 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1865 Aed-Chr5 21920088 21924832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1865 3 362 Glycoside Hydrolase AT3G07070 46.113 1.30e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed5g1865 PK_Tyr_Ser-Thr 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1865 - - gmx:100775722 715.687