Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1853 ATGTCTACCAGATCTACTCAACCACACACCACCGGCCCTGGTCGTGCAAAAGACTCAGGTGGTGCTTTGGTTGTATCAGCTGAGGATTTTGTGACCTCACAAAAAGGATCATCATCAAAGATTATCCCCCCATCAAAAAATAGCCAATTTTCATCACCAGGGTCTAGTGATTCAGTTTCTGTAGGAAATCATGCAAGACTATATGCAAGATCACCAGATAAATTGATAGGAGAGCTGTATTTTCTTGATGATGCAATCACATTGACACATGCGGAGCTGTCTAGAGCCCCAGCTGAAGTTTTGGGGAGAAGCAGTCATGGTACATCTTACAAGGCAACTTTGGAGAATGGCTTGTTATTGAGAGTGAAATGGTTAAGAGAAGGAGTGGCAAAACAGAGAAAAGAATTCACCAAAGAGGCTAAAAAAATTGCAAAAATCAGACACCCCAATGTTGTGGGATTGAGAGGGTACTACTGGGGTCCTACACAGCATGAGAAGCTTATTCTTTCAGATTACATCTCTCCTGGAAGTCTTGCAAATCGACCAGGACAAGAAGGTCCACCATTGACATGGACCATGAGGCTAAAAATAGCAGTTTATGTAGCACATGGCTTGAACTATCTCCACTTGGATCGTGCTGTTCCTCTTGGCAACCTCAAAGCAACAAATGTGTTGTTAGACACACGTGACTTACATGCACGTATAGCTGATTACTGCCTCCACAAGCTTACGACACAGGCTGGTACTTCTGAACAAATGCTTGAAGCTGGGGTATGTGCACCAGAGCTTGCTGCTTCCGATAAGCCAATGCCCTCATTCAAATCAGATGTATATACTTTTGGGGTTATACTTTTGGAGCTTTTAACTGGAAGGTGTGCTGGTGATGTTGTGTCTGGTGAGAAGGAAGGTGTTGATTTGACAAATTGGGTGAGGTTGCGTGTTGCACAAGGTAGAGGATCAGAGTGTTTTGATGCTGCATTGGTGCAAGAAATGGGTAATTCAGTTGTTGAAGAGGGACTGAACGAGGTCCTTGGAATAGCCATTCGATGCATAAGTTCTGTTTCTGAGAGGCCAGGTATCAAGACTGTATATGAAGATCTTTCGTCTATATAG 1113 0.4349 MSTRSTQPHTTGPGRAKDSGGALVVSAEDFVTSQKGSSSKIIPPSKNSQFSSPGSSDSVSVGNHARLYARSPDKLIGELYFLDDAITLTHAELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFTKEAKKIAKIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLANRPGQEGPPLTWTMRLKIAVYVAHGLNYLHLDRAVPLGNLKATNVLLDTRDLHARIADYCLHKLTTQAGTSEQMLEAGVCAPELAASDKPMPSFKSDVYTFGVILLELLTGRCAGDVVSGEKEGVDLTNWVRLRVAQGRGSECFDAALVQEMGNSVVEEGLNEVLGIAIRCISSVSERPGIKTVYEDLSSI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1853 370 PANTHER OS07G0626500 PROTEIN 19 370 - -
Aed5g1853 370 Gene3D Transferase(Phosphotransferase) domain 1 173 370 - -
Aed5g1853 370 ProSiteProfiles Protein kinase domain profile. 95 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1853 370 Pfam Protein tyrosine and serine/threonine kinase 99 290 IPR001245 GO:0004672|GO:0006468
Aed5g1853 370 MobiDBLite consensus disorder prediction 1 60 - -
Aed5g1853 370 MobiDBLite consensus disorder prediction 30 60 - -
Aed5g1853 370 PANTHER - 19 370 - -
Aed5g1853 370 Gene3D Phosphorylase Kinase; domain 1 80 172 - -
Aed5g1853 370 SUPERFAMILY Protein kinase-like (PK-like) 98 366 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1853 Aed-Chr5 21835739 21837136 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1853 77 370 Receptor kinase-like Gene Family AT3G51740 40.333 1.78e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed5g1853 PK_Tyr_Ser-Thr 3.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1853 - - gmx:100777862 593.964