Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1814 ATGGCTGATTATTCAGCAGGAACTGAATCCCATGAGGTGGTTGTAAATGTAACCAAGGACAAAACATTGGAACGCTCAGACTCCGTTGTCTCTGTTCCTTTCTTGCAGAAGTTGGTAGCTGAGGTGGTGGGAACATATTTCTTAATATTTGCAGGGTGTGCTTCAGTGGTGGTGAACAAGAACCACGACAACGTGGTAACACTTCCTGGGATAGCAATTGCTTGGGGGCTGGTTGTGATGGTTTTGGTCTACACTGTTGGTCACATTTCTGGTGCCCATTTCAATCCTGCCGTCACCATTGCTTTTGCGTCCACCAAAAGGTTCCCCTTCACGCAGGAAACAGTTTTCCTCGTTCATCTATCAGCTGTTTCGTCGTTAATGGATGAGAATTCAGCAACAAATGAAACCCATGAGGTGGTTTTAGATGTAAACAAGGATGTCTCTAGACCAACTGAACCCTCCTCACGCTCTTTTGTCAATGTTTCTTTCTTGCAGAAGGTGGTAGCTGAGGTGGTAGGCACGTATTTTTTGATATTTGCAGGCGGTGCTGCAGTAGTAGTGAACAAGAACAACAACAACGTGGTAACACTTCCTGGGATATCAATTGTTTGGGGACTGGCTGTCATGGTGTTGGTTTACTCGGTTGGTCACATCTCTGGTGCCCATTTCAATCCTGCTGTCACCATTGCTTTTGCCTCCACCAGAAGGTTTCCCTTCAAGCAGGTACCAGTTTATATAATAGCTCAGGTTATTGGATCTACGTTTGCAAGTGGAACTCTGAGACTATTATTTAGTGGCAAGGAAGCTCAGTTTTCAGGAACACTCCCATCTGGCTCTAACCTGCAAGCTTTTGTCATTGAATTCTTAATCACCTTTTTCCTTATGTTTGTCATTTCCGGGGTTGCTACTGATAATAGAGCGATCGGTGAGTTGGCCGGGATTGCCGTTGGGTCCACAGTGTTGTTGAACGTGATGTTTGCAGGGCCTATCACGGGAGCATCAATGAACCCAGCAAGAAGCATAGGACCAGCGTTTGTACACAGTGAATATCGAGGAATATGGATATATTTAGTGTCACCAATTCTTGGAGCTGTGGCTGGCGCATGGATCTATAATAGTATTCGTTACACGGATAAACCACTGCGTGAGATCACCAAGAGTGCCTCTTTTCTCAAAGGAGTAGGGCGTAGTGGTAGCTCTAGGTGA 1206 0.4552 MADYSAGTESHEVVVNVTKDKTLERSDSVVSVPFLQKLVAEVVGTYFLIFAGCASVVVNKNHDNVVTLPGIAIAWGLVVMVLVYTVGHISGAHFNPAVTIAFASTKRFPFTQETVFLVHLSAVSSLMDENSATNETHEVVLDVNKDVSRPTEPSSRSFVNVSFLQKVVAEVVGTYFLIFAGGAAVVVNKNNNNVVTLPGISIVWGLAVMVLVYSVGHISGAHFNPAVTIAFASTRRFPFKQVPVYIIAQVIGSTFASGTLRLLFSGKEAQFSGTLPSGSNLQAFVIEFLITFFLMFVISGVATDNRAIGELAGIAVGSTVLLNVMFAGPITGASMNPARSIGPAFVHSEYRGIWIYLVSPILGAVAGAWIYNSIRYTDKPLREITKSASFLKGVGRSGSSR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1814 401 Pfam Major intrinsic protein 159 371 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g1814 401 Pfam Major intrinsic protein 30 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g1814 401 PANTHER AQUAPORIN NIP2-1 127 395 IPR034294 -
Aed5g1814 401 PANTHER AQUAPORIN NIP2-1 1 119 IPR034294 -
Aed5g1814 401 CDD MIP 165 372 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g1814 401 TIGRFAM MIP: MIP family channel proteins 169 371 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g1814 401 Gene3D Glycerol uptake facilitator protein. 121 385 IPR023271 -
Aed5g1814 401 Gene3D Glycerol uptake facilitator protein. 20 119 IPR023271 -
Aed5g1814 401 SUPERFAMILY Aquaporin-like 29 114 IPR023271 -
Aed5g1814 401 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 127 395 - -
Aed5g1814 401 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 119 - -
Aed5g1814 401 ProSitePatterns MIP family signature. 93 101 IPR022357 -
Aed5g1814 401 ProSitePatterns MIP family signature. 222 230 IPR022357 -
Aed5g1814 401 SUPERFAMILY Aquaporin-like 159 385 IPR023271 -
Aed5g1814 401 PRINTS Major intrinsic protein family signature 317 339 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g1814 401 PRINTS Major intrinsic protein family signature 204 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g1814 401 PRINTS Major intrinsic protein family signature 286 304 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g1814 401 PRINTS Major intrinsic protein family signature 165 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g1814 401 PRINTS Major intrinsic protein family signature 241 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed5g1814 401 PRINTS Major intrinsic protein family signature 354 374 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1814 Aed-Chr5 21618035 21625767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1814 161 400 Major Intrinsic Protein MIP AT5G37810 60.744 5.32e-101 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1814 K09874 - gmx:100794883 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1814 5 21618035 21625767 Aed5g1814 5 21618035 21625767 ECH