Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1812 ATGAAACTTTTAATTGTAGAATATTTTCAAGCTCCCCTGAGGAATGACCATTCTCGTGTCAGATTTGAAAAGGAAAAAGGATTTAAAAAAGTTGACCCAGAACAATGGGAATTTGCCAATGATGATTTCGTAAGAGGGCAACCTAATCTTATGAAGAACATCCATAGACGGAAGCCGGTTCATAGCCATTCTATCCAGAATCTCCAAGCACAGGGCCCAATAGGGGAGTCAGAAAGGCAGAGTTTTACTGATGAAATAGAGAAGCTTAAACATGATAAGGAGCAATTTCTTGTGGAATTACAGAAATATCAGCATGAGTGGCAGTCATATGAGATACAAATACATTGCTCAAAAGATCGGTTGGAAAAATTGGAACAGAATCAACAAAGGATGGTTTCTTCTGTTTCTCATGCATTGCAGAAACCTGTGATTTCTATAAATATCTTGCCTCTGACAGAAACCATGGATAGAAAACGAAGGTTGCCGAGAAGTGGCCACTTTTATGAGGAAGCTAGCATTGTAGATGCTATTGAAACTTCCCAAATGTTACCAAGAGAAAATGCAGACAATGCCACTGTCTTGACATTAAACGTGGAGCGACTAGATCAGCTTGAATCATCCATGGCGTTTTGGGAGGCTATTGTACATGATATTGGCGACTCCGCTGTTCAAATTCAGTCAAACATGGATTTGGATGAATCTACAAGTTGTGCTGATAGTCCATCTATATCTTGTGCGCAATTAGATGTTGAAGTTCGGCCTAAGTCATCTGGAATTGACATGAACTCTGAGCCAACTACAGCTGCTGTTCCTGAGCCTGTTGCATCAAAAGAACAACCTGCGGGAACCACTGTTGCAACAACTGGTGTTAATGATGTATTCTGGGAGCAGTTCTTGACAGAGGATCCTGGTGCATCTGAAACACAGGAAGTGCAGTCAGAAAGGAAGGATTATGATGGCAGAAAGAATGAAGGAAAACCCAGCGACGTTAGCAAATTTTGGTGGAACAAACGGAATGCAAATAATCTTCCAGAACAGATGGGGCATGTTGGTCAAGCAGAGAAAACTTAA 1071 0.4099 MKLLIVEYFQAPLRNDHSRVRFEKEKGFKKVDPEQWEFANDDFVRGQPNLMKNIHRRKPVHSHSIQNLQAQGPIGESERQSFTDEIEKLKHDKEQFLVELQKYQHEWQSYEIQIHCSKDRLEKLEQNQQRMVSSVSHALQKPVISINILPLTETMDRKRRLPRSGHFYEEASIVDAIETSQMLPRENADNATVLTLNVERLDQLESSMAFWEAIVHDIGDSAVQIQSNMDLDESTSCADSPSISCAQLDVEVRPKSSGIDMNSEPTTAAVPEPVASKEQPAGTTVATTGVNDVFWEQFLTEDPGASETQEVQSERKDYDGRKNEGKPSDVSKFWWNKRNANNLPEQMGHVGQAEKT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1812 356 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 14 343 IPR027725 -
Aed5g1812 356 MobiDBLite consensus disorder prediction 308 328 - -
Aed5g1812 356 MobiDBLite consensus disorder prediction 256 281 - -
Aed5g1812 356 Gene3D - 13 58 IPR036388 -
Aed5g1812 356 Coils Coil 79 127 - -
Aed5g1812 356 MobiDBLite consensus disorder prediction 301 356 - -
Aed5g1812 356 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-4C-LIKE 14 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1812 Aed-Chr5 21606188 21609119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1812 4 356 HSF AT4G18880 43.132 1.19e-84 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1812 K09419 - gmx:100798004 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1812 5 21606188 21609119 Aed5g1812 5 21606188 21609119 ECH
Aed9g0438 9 3075918 3077765 Aed5g1812 5 21606188 21609119 ECH
Aed5g1812 5 21606188 21609119 Aed9g0438 9 3075918 3077765 PCT