Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1811 ATGAAGTGGGGTGGGAAAAAAAATTCTCTTTCTTCTTCTTCTAGGCCTTCTTTCATATCTCATGTATCTCCTTTTTCATGGCTTTCCAAGTTCAAACAGATGAGGATCAACTCAGAGCCAAAACCTGGCACACTGAAGCAGAATGCAAGGCAGAACTCAACTCCATCTGATAACAGTTCACCCCATTATGCTTGTGGGAATAGAGGCAGGTTTTATGGAGGTGATGATGAATCTTTCTGGAGACTCTCATTTGGTGAAGAGGGTAATGAGCATAGGAAAAGTGAAGATATTCTGAAACCAGTGAAGTGCAATTTGGATGCTGAAGCTGAACATGCCATTCCATCCTCAAGTTTCCCAACTGCACTGAATAATGCTAAAAGACAAGGCAGAAAAGAAGGCACTCAGAAGATGAAGCAGAAGGACACTGGAGTGAGACAAGAAACAAGAATTCTGAATGAAGCAGCAACGAGTGTGAAGGAACTTGAATCCTTAAGGAGGAGGTATGAGAGGAGAGCACAAAGAGTTTTGCAAGAGCAGCTCTTGAAATTGGGAAAAGCTGAAGAGGAAGCTGAGTTTGCATCAAGTCCATTCTTAGAAAATGATGATGTGCTGCAATTTGAGTCACCAAGAACAATTTGCACGCCAAGAAAGCATTTTTTTGTAGATTCAAAGAGTTCTGGCCTTGGAAGTCTCAGAGAAGCTCGTGTGATTAGTCCCCAATTGGGTTCTGAGGAGTTGAAATTGAAACCAAAGAGTAACCAACAAAGGCAATCACTTCATGTGAACAGAGAAAACCAGAGGAGGAAACCAAAGCACAACTCAAAGGTTAGAGTATATTCTCCAAGGATGGGTTCCAAGGTTGAATTCCGAAAAATAAAGGCCATAGAAGAGAAGAAGAAAGCAAAACTGAAGATGAAGAAAGAAGAGGAGGAAACAGAAGAAGGGTTAGATAGCTTTGCTGTGGTGAAATGTTCTTTGGATCCACAGAAAGATTTCAGAGATTCAATGATTGAGATGATCACAGAGAAACAGATCAGCGAGCCAGAAGAAATGGAAGATCTTTTAGCATGTTATCTGACTTTGAATTCCAATGAGTACCATGATCTCATCATCCAAGTGTTCAAGCAAGTATGGTTGTGCATGAGCCATGCCAGTTCGGGTATTCAATCAGACAAGCAATGTTGCTGTTGTGATTAA 1197 0.411 MKWGGKKNSLSSSSRPSFISHVSPFSWLSKFKQMRINSEPKPGTLKQNARQNSTPSDNSSPHYACGNRGRFYGGDDESFWRLSFGEEGNEHRKSEDILKPVKCNLDAEAEHAIPSSSFPTALNNAKRQGRKEGTQKMKQKDTGVRQETRILNEAATSVKELESLRRRYERRAQRVLQEQLLKLGKAEEEAEFASSPFLENDDVLQFESPRTICTPRKHFFVDSKSSGLGSLREARVISPQLGSEELKLKPKSNQQRQSLHVNRENQRRKPKHNSKVRVYSPRMGSKVEFRKIKAIEEKKKAKLKMKKEEEETEEGLDSFAVVKCSLDPQKDFRDSMIEMITEKQISEPEEMEDLLACYLTLNSNEYHDLIIQVFKQVWLCMSHASSGIQSDKQCCCCD 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1811 398 MobiDBLite consensus disorder prediction 1 20 - -
Aed5g1811 398 ProSiteProfiles OVATE domain profile. 321 380 IPR006458 -
Aed5g1811 398 Coils Coil 151 189 - -
Aed5g1811 398 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 389 IPR038933 GO:0045892
Aed5g1811 398 MobiDBLite consensus disorder prediction 36 69 - -
Aed5g1811 398 PANTHER TRANSCRIPTION REPRESSOR OFP4 9 389 - -
Aed5g1811 398 MobiDBLite consensus disorder prediction 117 144 - -
Aed5g1811 398 MobiDBLite consensus disorder prediction 129 144 - -
Aed5g1811 398 Pfam Transcriptional repressor, ovate 325 381 IPR006458 -
Aed5g1811 398 MobiDBLite consensus disorder prediction 248 277 - -
Aed5g1811 398 MobiDBLite consensus disorder prediction 40 63 - -
Aed5g1811 398 Coils Coil 291 313 - -
Aed5g1811 398 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 320 381 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1811 Aed-Chr5 21599966 21601162 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed5g1811 Ovate 7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1811 - - gmx:106798868 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1811 5 21599966 21601162 Aed9g0439 9 3080163 3085178 PCT