Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1801 ATGACAAAGGAAGATGCGAAAGTGAAACTGTTGAGCTTCTGGGTGAGTCCATTTGGCAAAAGGGTTGAGTGGGCATTGGAACTAAAGGGTATAGAGTACGAATATATAGAAGAAGACATCTTCAACAAGAGCAATCTCCTTCTCGAGTTGAACCCGGTTCACAAGAAGGTTCCGGTTCTTGTCCATGCCCAGAAATCAATCGCTGAGTCATTCATCATCCTTGAATACATTGATGAAACATGGAAGCAGTATCCATTGTTACCACACCATCCTCATCAAAGAGCTCTTGCTCGCTTCTGGGCTACTTCTGTTGAACAAAAGCTTGGGAAGGCTGGATGGGTAGCAATGTCTAGCAGCGGGGAAGAACAGGAAAAGGCTGTGAAGGAAGCCACGGAAATGATGGAGAAAATAGAACAAGAGGTTAAAGGGAAGATTTTTTTTGGAGGGGACAATATTGGGTACCTTGACATTGCACTTGGATGGATCGCGTACTTGGTTCCTGTTTGGGAGGAAGTTGGATCAATGCAAATAATTGACCCATTGAAATTTCCAGCCACCACTTCATGGATCACCAATTTTCTTAACCACCCTGTCATCAAGGACAGCTTGCCCCCAAGAGATAAGATGCTTCTTTATTACCACAATCGCAAGAACAACTTGCCATCCATCTTTCATAACTTGGTCAAGGTTTAG 693 0.4372 MTKEDAKVKLLSFWVSPFGKRVEWALELKGIEYEYIEEDIFNKSNLLLELNPVHKKVPVLVHAQKSIAESFIILEYIDETWKQYPLLPHHPHQRALARFWATSVEQKLGKAGWVAMSSSGEEQEKAVKEATEMMEKIEQEVKGKIFFGGDNIGYLDIALGWIAYLVPVWEEVGSMQIIDPLKFPATTSWITNFLNHPVIKDSLPPRDKMLLYYHNRKNNLPSIFHNLVKV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1801 230 CDD GST_N_Tau 8 81 - -
Aed5g1801 230 SFLD Main.3: Omega- and Tau-like 4 220 IPR045073 -
Aed5g1801 230 CDD GST_C_Tau 91 212 IPR045074 GO:0004364|GO:0006749
Aed5g1801 230 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 220 IPR045073 -
Aed5g1801 230 SFLD Glutathione Transferase (cytosolic) 4 220 IPR040079 -
Aed5g1801 230 PANTHER GLUTATHIONE S-TRANSFERASE 6 220 - -
Aed5g1801 230 SUPERFAMILY Thioredoxin-like 7 106 IPR036249 -
Aed5g1801 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Aed5g1801 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 222 IPR010987 -
Aed5g1801 230 Gene3D - 87 221 - -
Aed5g1801 230 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Aed5g1801 230 Coils Coil 120 140 - -
Aed5g1801 230 Gene3D Glutaredoxin 1 86 - -
Aed5g1801 230 Pfam Glutathione S-transferase, C-terminal domain 110 197 IPR004046 -
Aed5g1801 230 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1801 Aed-Chr5 21566683 21568504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1801 7 220 Glutathione S-transferase Gene Family AT2G29420 42.991 3.18e-65 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1801 K00799 - gmx:547585 431.024