Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1800 ATGGGAAGCGAAGATGTGAAGCTGATGAACTTTTGGGCGAGTCCATTTGGCAAAAGGGTTGAGTGGGCTTTGAAACTGAAGGGTGTAGAATATGAGTATATTGAAGAAGATGTCTACAACATGAGTAGTCTCGTCATGGAGTTGAACCCGGTTCACAAGAAGGTTCCGATTCTTATACATGCCCACAAACCGATCGCTGAGTCATTCATAATCCTTGAATACATTGATGAAACATGGAAGCAGTATCCACTATTGCCTCAACATCCTTATCAAAGTGCACTTGCTCGCTTTTGGGCTAATTTCGCTGAGCATAAGCTTGCAAGGGCAACACGAAAAGCAATGAGTAGCAGCGGGGATGAACGTGAAAAGGCTCTTAAGGAAACGAGAGAAGCAATAGAAAAGATAGAGGAAGAGATTAAGGGGAAGAAATTCTTTGGAGGGGAGAATATAGGGTACCTTGACATTGCACTTAGATGGATCTCTTACTGGCTTCCGGTTGTAGAGGAAGTTGCATCCATGCAGATAATAGACACATTCAAATTTCCAGCCATTACTGCATGGATCACCAATTTTCTTAGCCACCCTGTAATCAAGGACAGTTTGCCCCCAAGAGATAACATGCTTGTTTACTACCGAAACTTGGTCAAGGTCTAG 654 0.4312 MGSEDVKLMNFWASPFGKRVEWALKLKGVEYEYIEEDVYNMSSLVMELNPVHKKVPILIHAHKPIAESFIILEYIDETWKQYPLLPQHPYQSALARFWANFAEHKLARATRKAMSSSGDEREKALKETREAIEKIEEEIKGKKFFGGENIGYLDIALRWISYWLPVVEEVASMQIIDTFKFPAITAWITNFLSHPVIKDSLPPRDNMLVYYRNLVKV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1800 217 Coils Coil 118 138 - -
Aed5g1800 217 SFLD Glutathione Transferase (cytosolic) 2 214 IPR040079 -
Aed5g1800 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 217 IPR010987 -
Aed5g1800 217 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Aed5g1800 217 Gene3D - 85 217 - -
Aed5g1800 217 CDD GST_N_Tau 6 79 - -
Aed5g1800 217 Pfam Glutathione S-transferase, C-terminal domain 116 195 IPR004046 -
Aed5g1800 217 SFLD Main.3: Omega- and Tau-like 2 214 IPR045073 -
Aed5g1800 217 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Aed5g1800 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Aed5g1800 217 PANTHER GLUTATHIONE S-TRANSFERASE 1 213 - -
Aed5g1800 217 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Aed5g1800 217 SUPERFAMILY Thioredoxin-like 6 105 IPR036249 -
Aed5g1800 217 Gene3D Glutaredoxin 1 84 - -
Aed5g1800 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 213 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1800 Aed-Chr5 21565357 21566400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1800 2 212 Glutathione S-transferase Gene Family AT2G29420 45.498 4.63e-75 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1800 K00799 - gmx:100795880 348.206