Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1795 ATGGATAGTAAGTTCACCAAAAACAACCGCAACAGCAGCTCATATATCAATGAGCAAGAAGAAGACACTGATGTAGCTCAAGAAAACATTGCTGAGTCCCCTCCTTCTAATTCCACTGTGTTCAACATCGATGGCTTAGTCCCCTCCCCCACTTCTTCTTCGTCAAAGAGAAGGAGGGCAATACAGAAGAGGGTGGTGCAAATCCCAATCAAGGAGACTGAAGTGTGTAGGCTAAAAGGAGAGAGCAACACCCCGCCGTCGGATTCATGGGCTTGGAGAAAGTATGGCCAGAAACCCATCAAGGGTTCCCCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCGAAGGGCTGTCCGGCACGGAAACAAGTGGAAAGGAGCTGCGTGGACCCCACAATGCTAGTCGTAACTTACTCCTCCGACCACAACCATCCCTGGCCACCTTCTAGAAACCACGCCAGGCCCACCAAAAAGCCCGACCCCGAACCTGTTGCGGACCTGGTCGAACCGGAGCCCGAACAGGAGGAGAAGGAGAAGTTCGCGGACCTGGGTGGGGACGAGTCCATGATAACAACCGCGGAGGAATTGGGTTGGCTGGGGGAGATGGAAACGACGTCGTCCACGGTGCTAGAAAGCCCAATCATGACGTACCATGCTGACGTGGCGCTGATGCCCATGAGGGAAGAGGACGAGTTGCTCTTCGCCGACCTCGGCGAGCTGCCGGAGTGCTCCTTGGTGTTCCGGCAGCGGCAGCGCTACACGGCGCCCTGGTGTGAGACCACAAGTTGA 789 0.5513 MDSKFTKNNRNSSSYINEQEEDTDVAQENIAESPPSNSTVFNIDGLVPSPTSSSSKRRRAIQKRVVQIPIKETEVCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCVDPTMLVVTYSSDHNHPWPPSRNHARPTKKPDPEPVADLVEPEPEQEEKEKFADLGGDESMITTAEELGWLGEMETTSSTVLESPIMTYHADVALMPMREEDELLFADLGELPECSLVFRQRQRYTAPWCETTS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1795 262 ProSiteProfiles WRKY domain profile. 87 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed5g1795 262 MobiDBLite consensus disorder prediction 140 183 - -
Aed5g1795 262 MobiDBLite consensus disorder prediction 1 62 - -
Aed5g1795 262 Gene3D WRKY domain 72 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed5g1795 262 MobiDBLite consensus disorder prediction 1 20 - -
Aed5g1795 262 MobiDBLite consensus disorder prediction 29 56 - -
Aed5g1795 262 Pfam WRKY DNA -binding domain 88 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed5g1795 262 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 249 IPR044810 GO:0003700
Aed5g1795 262 SMART WRKY_cls 86 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed5g1795 262 MobiDBLite consensus disorder prediction 153 183 - -
Aed5g1795 262 MobiDBLite consensus disorder prediction 77 97 - -
Aed5g1795 262 SUPERFAMILY WRKY DNA-binding domain 84 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed5g1795 262 PANTHER WRKY TRANSCRIPTION FACTOR 65-RELATED 2 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1795 Aed-Chr5 21534992 21537145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1795 22 250 WRKY Transcription Factor Family AT1G29280 56.790 1.67e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed5g1795 WRKY 5.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1795 - - gmx:100127392 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1795 5 21534992 21537145 Aed5g1795 5 21534992 21537145 ECH