Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1788 ATGAAGAATTGTGATGAATGGAAACCTTTCCTAGTAATGATAGCAATAGATTTTTCTTTAACCATGGTGAACATTCTTCTCAAGAAAGTCCTTCAAGAAGGAATGAACCATTTGGTTTTCATCACATATCGTCTCTCAGTTTCTACTATATTTTTGGGCCCCATCAGCTACTTTAAGGAAAGAGATGGAAGACCACGGCTCACATTTCAAATTTTATGCTACCTTTTCTTCAGTGCAATTATTGGGGCATCCGTCACACAATACTTCTTCCTTCTGGGGATGGAATACACCTCAGCTACCTTTGCTTGTGCCTTTGTCAATATGGTACCAGTGATCACATTCATTATGGCATTACCATTTGGACTAGAAACAGTGAACTTTAAATGCAAAGGTGGGAAAGCGAAGATTCTGGGTACAATTGTGTGCATAGGAGGGGCATTGATGTTGACACTTTACAAAGGAAAGCCCTTGTTTGATGGCTCTCACGATCAATCTGCAATGGACCAAGCTTCAACTACTACAAGAACAACACAGAAATGGTCCCTTGGTGTAGTAGCTTTGACTATGGGAACCCTCTTCTGGTCCTTTTGGTTTATTTTACAGTCAAAGATAGGCAAGAGATATCCTTGCCAGTATTCAAGCACAGCCATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTCTCCACTGGCAGCAACAACTTCTCCTCCTGGGTTCTCAATGATAAGATACAAATAATCACCGTTCTTTATTCTGGGATAGTTGGGTCAAGTGTGTGCTATGTGGGCATGTCATGGTGCGTAAAAAAGAGGGGTCCGGTCTTTACTGCAGCATTCAGCCCTCTTGTTCAGATAATGTCCGGCATGATTGATATCCCCTTCTTGCACGAGCAGCTTCATCTTGGAAGGTGA 921 0.4213 MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFITYRLSVSTIFLGPISYFKERDGRPRLTFQILCYLFFSAIIGASVTQYFFLLGMEYTSATFACAFVNMVPVITFIMALPFGLETVNFKCKGGKAKILGTIVCIGGALMLTLYKGKPLFDGSHDQSAMDQASTTTRTTQKWSLGVVALTMGTLFWSFWFILQSKIGKRYPCQYSSTAIMTFFGAMQAAILGFSTGSNNFSSWVLNDKIQIITVLYSGIVGSSVCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPFLHEQLHLGR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1788 306 PANTHER WAT1-RELATED PROTEIN 9 305 IPR030184 GO:0016021|GO:0022857
Aed5g1788 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Aed5g1788 306 PANTHER WAT1-RELATED PROTEIN 9 305 - -
Aed5g1788 306 Pfam EamA-like transporter family 182 304 IPR000620 GO:0016020|GO:0016021
Aed5g1788 306 Pfam EamA-like transporter family 24 150 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1788 Aed-Chr5 21473200 21474773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1788 7 255 Nodulin-like Gene Family AT3G30340 49.600 7.67e-86 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1788 - - gmx:100813873 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1788 5 21473200 21474773 Aed9g0452 9 3156768 3160033 PCT