Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1776 ATGAAAGCCATAGGGGGGGCATTTGGATTATGGCTCCGAATTTATGTTGGTTTGATTTCCCTGTTGGGAATTCGCCAGTGTTGGTCTCTCAACAATGAAGGATTAACCTTGTTAGAATTTCGGGGAAGAATAACTTCTGATCCTTTTGTTGCCCTGGCAAATTGGAATTCAAATGATTGCAACCCTTGCAAATGGCTCGGTGTTCATTGTGTTGATGGTAAAGTGCAAACGCTGGTCCTACCTGATCTATCTTTGGAAGGGACATTGGCTCCTGAGCTTGGGAAACTTAGTCATCTAAAATCCCTTGTACTCTACAAGAACAGTTTTTCTGGTACCATTCCCAAAGAACTTGGAGATCTGGAAAAGCTGGAGTTATTGGATTTAAGGGGGAATGACTTGACTGGATGTATACCTGCAGAAATTGCCAGGGTGGTGTTGTCAAAACAATTGTCGGTTTGTGACAATAAATTTGAAGGCAGTGATTCTCAAGAGCTCAGATTGCCCTCTGATAACAATCATTTAACTTCTTTGGCAACTTTATCTGGTGGCAATAACAGAAAGCTTGCACACCGGCTCAAGCTAGGAAAGGCTACTCCTGATGCCTATGAAGAGAAATACTTTGACAATTTGACCAGTTCTGATGAGTCAGATATTGGCCAGAATGTATCAAATCTAGTCAATTCAGTACGACGGAAGTTGCTTGAGGAGTCCAGTAACCTTGCAGCTGCACCTTTCAGTGGTGGGCCTACTATACAGATCAGTTCTATTCCAATTACCCAGAGCAGTGGAGCTTTCCCAGCTGTGCCAGACACCGATAAGAAACAAAATCAGCCACCTGCACCATTGCCTTCACCTTCTGATTCTCTACCTGTGAATCAAGCAAGTCAACAAAATTCAGCTAATGGTGCATCTGGAAAATTGTGGAAGTATTTTATTATAATCGCAGGTGTTGCTGTCTTGGTCATTGTTGTTTTTATCATGCTTTGCATTTGGCGAAAACGAGCAGCAAAAGTAATAAAGCCCTGGAAGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTATAACAGGGGTCCCCAAGTTGAATCGGGGAGAGCTGGAAACAGCCTGTGAAGATTTCAGCAATATTATTAATAGTTTTGATGAATGCACCATATACAAAGGAACACTATCCAGTGGAGTTGAGATTGCTGTTGATTCAACGATTGTTACTTCTGCCCATGATTGGTCAAAGAACATGCAGACAGCCTATCGCAAAAAGGACGTTGAACCTCTTGACTGGAGCGCAAGGATGAGGATTATTATGGGCACAGCTTATTGTCTTCAGTATATGCACCATGATCTAAATCCACCAGTAGCTCATTCCAACCTCAACTCAGTTGCTATATTATTAACAGATGACTTTGCTGCTAAGATATCAGAGATCGCTTTTGGCAAGCATGCAAAATCCAACACAAGTGGAGATGAATCACAGAGATCTGAGAAATCTGAGTTGCCACCCGAGGCTGATCCCGAAACTGATGTCTATAACTTTGGAGTATTGTTGCTTGAAATCATTTCTGGGAAACTACCTTACTCTGAAGAACAAGGCCACCTTGCCAACTGGGCTGCTAAGCACTTGAATGATAAGCAAAGCATCAAGAATCTGATCGATCCCACACTGCAGTCCTTCAAAGAAGAAGAACTTGAAGTCATCTGTGAGGTGACCAAAGATTGTCTTCAATCTGATCCAAGGTTAAGACCTACGATGAAGGACATACCTCCCAGGCTGAGGGAAGTGCTTCATGTATCCCCTGAGCAAGCTGTCCCAAGACTCTCTCCACTCTGGTGGGCTGAACTGGAGATCTTATCAGTGGAGGCCACTTAA 1866 0.4303 MKAIGGAFGLWLRIYVGLISLLGIRQCWSLNNEGLTLLEFRGRITSDPFVALANWNSNDCNPCKWLGVHCVDGKVQTLVLPDLSLEGTLAPELGKLSHLKSLVLYKNSFSGTIPKELGDLEKLELLDLRGNDLTGCIPAEIARVVLSKQLSVCDNKFEGSDSQELRLPSDNNHLTSLATLSGGNNRKLAHRLKLGKATPDAYEEKYFDNLTSSDESDIGQNVSNLVNSVRRKLLEESSNLAAAPFSGGPTIQISSIPITQSSGAFPAVPDTDKKQNQPPAPLPSPSDSLPVNQASQQNSANGASGKLWKYFIIIAGVAVLVIVVFIMLCIWRKRAAKVIKPWKTGISGQLQKAFITGVPKLNRGELETACEDFSNIINSFDECTIYKGTLSSGVEIAVDSTIVTSAHDWSKNMQTAYRKKDVEPLDWSARMRIIMGTAYCLQYMHHDLNPPVAHSNLNSVAILLTDDFAAKISEIAFGKHAKSNTSGDESQRSEKSELPPEADPETDVYNFGVLLLEIISGKLPYSEEQGHLANWAAKHLNDKQSIKNLIDPTLQSFKEEELEVICEVTKDCLQSDPRLRPTMKDIPPRLREVLHVSPEQAVPRLSPLWWAELEILSVEAT 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1776 621 Pfam Protein tyrosine and serine/threonine kinase 412 587 IPR001245 GO:0004672|GO:0006468
Aed5g1776 621 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Aed5g1776 621 PANTHER PROTEIN MALE DISCOVERER 2 7 420 - -
Aed5g1776 621 PANTHER PROTEIN MALE DISCOVERER 2 420 621 - -
Aed5g1776 621 Gene3D Transferase(Phosphotransferase) domain 1 410 602 - -
Aed5g1776 621 PANTHER LRR RECEPTOR-LIKE KINASE 7 420 - -
Aed5g1776 621 PANTHER LRR RECEPTOR-LIKE KINASE 420 621 - -
Aed5g1776 621 SUPERFAMILY L domain-like 30 187 - -
Aed5g1776 621 MobiDBLite consensus disorder prediction 481 505 - -
Aed5g1776 621 ProSiteProfiles Protein kinase domain profile. 293 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1776 621 MobiDBLite consensus disorder prediction 485 502 - -
Aed5g1776 621 SUPERFAMILY Protein kinase-like (PK-like) 416 609 IPR011009 -
Aed5g1776 621 MobiDBLite consensus disorder prediction 264 297 - -
Aed5g1776 621 Gene3D Ribonuclease Inhibitor 32 199 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1776 Aed-Chr5 21386055 21392030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1776 30 586 Receptor kinase-like Gene Family AT3G57830 23.767 1.94e-32 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aed5g1776 PK_Tyr_Ser-Thr 1.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1776 - - gmx:100808098 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1776 5 21386055 21392030 Aed5g1776 5 21386055 21392030 ECH
Aed9g0467 9 3249772 3257452 Aed5g1776 5 21386055 21392030 ECH