Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1775 ATGGCGTCGGCGAAGAAGGAAAACCCGAACCTCCTCCTGGGTCGGTTCGAGCTGGGGAGGCTCCTGGGGCATGGGACCTTCGCCAAGGTCCACCTGGCTCGGAACATAAAAAGCGGAGAAGCAGTAGCCATCAAGATAATCAACAAGGAGAAGATCCTCAAGGGCGGTTTGGTCTCTCACATAAAGCGCGAGATCTCCATTCTCCGCCGCGTCCGCCACCCCAACATCGTCCAGCTCTTCGAAGTCATGGCCACCAAAACTAAGATCTACTTCGTCATGGAGTACGTCCGCGGCGGCGAGCTCTTCAACAAGGTTGCCAAAGGAAGGCTTAAAGAAGAAGTCGCCAGAAAGTACTTCCAGCAATTGGTCTCCGCCGTCGAGTTCTGCCACGCGCGCGGTGTCTACCACAGGGACCTCAAGCCCGAGAATCTACTCCTCGACGAGGACGGCAACCTTAAAGTCTCCGACTTCGGACTCAGCGCCGTGTCGGACCAGATTAGGCAGGACGGCCTCTTCCACACGTTTTGCGGCACACCCGCCTATGTCGCTCCTGAGGTTCTGGGGCGCAAAGGCTACGATGGTGCAAAGGTTGATATTTGGTCTTGTGGGGTTGTCTTGTTTGTTCTCATGGCTGGATATCTCCCCTTCCATGACCTCAACGTTATGGCTATGTATAAGAAGATTTACCGGGGCGAGTTTCGGTGTCCCAGGTGGTTCTCTTCTGAACTCACTAGGCTTCTCACCAGGCTTCTTGATACTAATCCTCAGACAAGGATTTCCATTCCTGAAATCATGGAGAATCGCTGGTTCAAGAAGGGTTTCAAGCAAATCAAATTCTATGTTGAGGATGATAGAGTTTGTAGTTTTGATGATAAACAGCTGCTGCAGCAGCAACATGATGGTGATCATGATGATTTGGCAACATCGGATTCTGAGGTTGAAATTAGGAGGAGGAATTGTAATAATGGTTCGTTGCCAAGGCCTGCGAGTTTGAATGCTTTTGACATCATTTCGTTCTCTCAGGGCTTTGATCTCTCTGGGTTGTTTGAGGAAAAGGGTGATGAGGCCAGGTTTGTGTCTTCTGCTCCTGTGTCTAAGATTATATCGAAATTGGAGGAGGTTGCTCACTTGGTTAGTTTCACTGTGAGGAAGAAAGGCTGCAGGGTGAGCTTGGAGGGGTGCAGAGAAGGTGTCAAGGGGCCTTTGACCATTGCTGCTGAGGTTTTTGAGTTGACACCTTCCTTGGTGGTGGTGGAGGTTAAGAAAAAGGGAGGGGATAAGGCCGAGTATGACAACTTTTGTAACTCTGAGTTGAGACCCGCGTTGGAGAATTTGAGTATGGAGGAATCCGCTTCTTCTTCTTCTACAATGGAACAAACTGAAAAGCAAAAATACTCATGTGCCAGAGTAGAGAATAATGGGAGTACCTATGTAGCATTTATCAGCATAGATAGATGA 1458 0.4945 MASAKKENPNLLLGRFELGRLLGHGTFAKVHLARNIKSGEAVAIKIINKEKILKGGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLVSAVEFCHARGVYHRDLKPENLLLDEDGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLGRKGYDGAKVDIWSCGVVLFVLMAGYLPFHDLNVMAMYKKIYRGEFRCPRWFSSELTRLLTRLLDTNPQTRISIPEIMENRWFKKGFKQIKFYVEDDRVCSFDDKQLLQQQHDGDHDDLATSDSEVEIRRRNCNNGSLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSSAPVSKIISKLEEVAHLVSFTVRKKGCRVSLEGCREGVKGPLTIAAEVFELTPSLVVVEVKKKGGDKAEYDNFCNSELRPALENLSMEESASSSSTMEQTEKQKYSCARVENNGSTYVAFISIDR 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1775 485 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Aed5g1775 485 SUPERFAMILY Protein kinase-like (PK-like) 12 280 IPR011009 -
Aed5g1775 485 MobiDBLite consensus disorder prediction 445 465 - -
Aed5g1775 485 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 457 - -
Aed5g1775 485 MobiDBLite consensus disorder prediction 446 465 - -
Aed5g1775 485 Pfam Protein kinase domain 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1775 485 ProSiteProfiles NAF domain profile. 326 350 IPR018451 GO:0007165
Aed5g1775 485 CDD CIPK_C 332 442 - -
Aed5g1775 485 Gene3D Transferase(Phosphotransferase) domain 1 6 323 - -
Aed5g1775 485 PANTHER - 10 457 - -
Aed5g1775 485 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1775 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Aed5g1775 485 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1775 485 Pfam NAF domain 328 384 IPR004041 GO:0007165
Aed5g1775 485 Gene3D Kinase associated domain 1, KA1 328 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1775 Aed-Chr5 21381203 21383516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1775 11 449 CBL-interacting serine-threonine protein kinases AT4G18700 80.227 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed5g1775 Pkinase 4.7e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1775 - - gmx:100786078 791.186