Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1768 ATGGCCTCCACCAAGGAACGTGAAAACTTCGTCTACGTCGCCAAGCTCGCCGAACAAGCCGAACGCTATGAAGAAATGGTGGATGCAATGAAGAATGTGGCGAAGCTAAACGTGGAATTGACGGTAGAGGAGCGGAACCTTCTGTCGGTTGGGTACAAGAACGTGGTTGGTGCTCGTAGGGCTTCGTGGAGGATTCTTTCCTCTATTGAGCAGAAAGAAGAAGCCAAAGGAAACGACGTGAGTGTGAAGAGGATAAAGGAGTATAGGCAGAAGGTGGAGTCTGAGTTGTCCGATATTTGCAGTGATATCATGACTGTTATTGATGAACACCTTATTCCCTCTAGCACTGCTGGTGAACCTAGTGTCTTTTTCTACAAAATGAAGGGGGACTATTACCGGTACCTCGCTGAGTTCAAGTCCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAGGCATATCAGTCAGCTTCCACTTCTGCTGAGGCTGAGTTACCACCCACACATCCCATCCGTCTGGGCCTGGCTTTGAACTTCTCTGTCTTTTATTATGAAATTTTGAACTCTCCTGAAAGGGCCTGTCACCTTGCTAAGCAGGCATTTGATGAAGCAATCTCTGAGTTGGATACTCTGAGCGAGGAGTCTTACAAAGACAGCACCCTAATTATGCAGCTTCTGAGGGACAATCTAACCCTGTGGACTTCTGACATCCCTGAAGATGGAGAGGAACAAAAGGTGGATTCTGCGGGAGGCAATGATGCATAG 768 0.4766 MASTKERENFVYVAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRQKVESELSDICSDIMTVIDEHLIPSSTAGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMKAYQSASTSAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEEQKVDSAGGNDA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1768 255 Coils Coil 13 33 - -
Aed5g1768 255 Gene3D - 1 250 IPR036815 -
Aed5g1768 255 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Aed5g1768 255 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Aed5g1768 255 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Aed5g1768 255 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Aed5g1768 255 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Aed5g1768 255 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Aed5g1768 255 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Aed5g1768 255 Pfam 14-3-3 protein 14 235 IPR023410 -
Aed5g1768 255 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Aed5g1768 255 PANTHER 14-3-3-LIKE PROTEIN D ISOFORM X1 4 251 - -
Aed5g1768 255 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Aed5g1768 255 PANTHER 14-3-3 PROTEIN 4 251 IPR000308 -
Aed5g1768 255 SMART 1433_4 7 248 IPR023410 -
Aed5g1768 255 PIRSF 14-3-3 1 247 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1768 Aed-Chr5 21306518 21309728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1768 1 255 14-3-3 family AT2G42590 78.626 1.21e-153 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1768 K06630 - gmx:100807980 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1768 5 21306518 21309728 Aed5g1768 5 21306518 21309728 ECH